Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AL024507.2-201ENST00000606070 2574 ntBASIC19.61■□□□□ 0.73
RORAP35398 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RORAP35398 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RORAP35398 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
RORAP35398 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RORAP35398 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RORAP35398 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.6■□□□□ 0.73
RORAP35398 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.6■□□□□ 0.73
RORAP35398 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RORAP35398 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.6■□□□□ 0.73
RORAP35398 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RORAP35398 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.6■□□□□ 0.73
RORAP35398 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
RORAP35398 FAM201B-201ENST00000458407 597 ntBASIC19.6■□□□□ 0.73
RORAP35398 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.6■□□□□ 0.73
RORAP35398 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.6■□□□□ 0.73
RORAP35398 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RORAP35398 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RORAP35398 CYP2T3P-201ENST00000601990 817 ntBASIC19.6■□□□□ 0.73
RORAP35398 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RORAP35398 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RORAP35398 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.6■□□□□ 0.73
RORAP35398 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RORAP35398 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RORAP35398 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RORAP35398 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.59■□□□□ 0.73
RORAP35398 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RORAP35398 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.59■□□□□ 0.73
RORAP35398 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RORAP35398 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RORAP35398 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.59■□□□□ 0.73
RORAP35398 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.59■□□□□ 0.73
RORAP35398 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.59■□□□□ 0.73
RORAP35398 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RORAP35398 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RORAP35398 AL355472.2-201ENST00000422958 438 ntBASIC19.59■□□□□ 0.73
RORAP35398 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.59■□□□□ 0.73
RORAP35398 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.59■□□□□ 0.73
RORAP35398 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.59■□□□□ 0.73
RORAP35398 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.59■□□□□ 0.73
RORAP35398 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RORAP35398 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RORAP35398 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RORAP35398 KRT17P1-201ENST00000399211 1546 ntBASIC19.59■□□□□ 0.73
RORAP35398 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RORAP35398 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RORAP35398 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RORAP35398 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RORAP35398 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RORAP35398 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RORAP35398 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.58■□□□□ 0.73
RORAP35398 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
RORAP35398 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RORAP35398 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
RORAP35398 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RORAP35398 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RORAP35398 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RORAP35398 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RORAP35398 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RORAP35398 LSM12P1-201ENST00000411836 588 ntBASIC19.58■□□□□ 0.72
RORAP35398 AC007322.3-201ENST00000426526 701 ntBASIC19.58■□□□□ 0.72
RORAP35398 POU5F1P3-201ENST00000428824 1078 ntBASIC19.58■□□□□ 0.72
RORAP35398 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.58■□□□□ 0.72
RORAP35398 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.58■□□□□ 0.72
RORAP35398 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.58■□□□□ 0.72
RORAP35398 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RORAP35398 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RORAP35398 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
RORAP35398 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
RORAP35398 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RORAP35398 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RORAP35398 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RORAP35398 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.58■□□□□ 0.72
RORAP35398 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.58■□□□□ 0.72
RORAP35398 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.58■□□□□ 0.72
RORAP35398 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RORAP35398 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.57■□□□□ 0.72
RORAP35398 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RORAP35398 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RORAP35398 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.57■□□□□ 0.72
RORAP35398 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RORAP35398 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RORAP35398 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RORAP35398 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RORAP35398 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.57■□□□□ 0.72
RORAP35398 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.57■□□□□ 0.72
RORAP35398 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.57■□□□□ 0.72
RORAP35398 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.57■□□□□ 0.72
RORAP35398 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.57■□□□□ 0.72
RORAP35398 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.57■□□□□ 0.72
RORAP35398 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.57■□□□□ 0.72
RORAP35398 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RORAP35398 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RORAP35398 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RORAP35398 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.56■□□□□ 0.72
RORAP35398 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RORAP35398 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.56■□□□□ 0.72
RORAP35398 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RORAP35398 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RORAP35398 MCRIP2P1-201ENST00000394346 511 ntBASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms