Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Hps1O08983 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hps1O08983 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hps1O08983 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hps1O08983 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.68■□□□□ 0.26
Hps1O08983 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Hps1O08983 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Hps1O08983 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Hps1O08983 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hps1O08983 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hps1O08983 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hps1O08983 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hps1O08983 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hps1O08983 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Hps1O08983 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.68■□□□□ 0.26
Hps1O08983 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.68■□□□□ 0.26
Hps1O08983 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Hps1O08983 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hps1O08983 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hps1O08983 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hps1O08983 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hps1O08983 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hps1O08983 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.68■□□□□ 0.26
Hps1O08983 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hps1O08983 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.68■□□□□ 0.26
Hps1O08983 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.67■□□□□ 0.26
Hps1O08983 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hps1O08983 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Hps1O08983 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hps1O08983 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Hps1O08983 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hps1O08983 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hps1O08983 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.67■□□□□ 0.26
Hps1O08983 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.67■□□□□ 0.26
Hps1O08983 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Hps1O08983 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hps1O08983 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hps1O08983 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hps1O08983 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hps1O08983 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hps1O08983 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hps1O08983 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hps1O08983 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hps1O08983 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hps1O08983 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.67■□□□□ 0.26
Hps1O08983 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hps1O08983 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Hps1O08983 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hps1O08983 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.66■□□□□ 0.26
Hps1O08983 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.66■□□□□ 0.26
Hps1O08983 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hps1O08983 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hps1O08983 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hps1O08983 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hps1O08983 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hps1O08983 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Hps1O08983 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Hps1O08983 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hps1O08983 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hps1O08983 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hps1O08983 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hps1O08983 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hps1O08983 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hps1O08983 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hps1O08983 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hps1O08983 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hps1O08983 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hps1O08983 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hps1O08983 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hps1O08983 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hps1O08983 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Hps1O08983 Nespas-201ENSMUST00000143738 1083 ntBASIC16.65■□□□□ 0.26
Hps1O08983 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hps1O08983 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hps1O08983 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hps1O08983 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.65■□□□□ 0.26
Hps1O08983 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hps1O08983 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hps1O08983 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hps1O08983 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hps1O08983 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hps1O08983 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hps1O08983 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.65■□□□□ 0.26
Hps1O08983 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.65■□□□□ 0.26
Hps1O08983 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Hps1O08983 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hps1O08983 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hps1O08983 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hps1O08983 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Hps1O08983 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hps1O08983 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Hps1O08983 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Hps1O08983 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.64■□□□□ 0.25
Hps1O08983 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.64■□□□□ 0.25
Hps1O08983 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.64■□□□□ 0.25
Hps1O08983 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hps1O08983 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Hps1O08983 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hps1O08983 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hps1O08983 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms