Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 AC141476.1-201ENSMUST00000224988 3387 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Gm26645-201ENSMUST00000181076 1316 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 AC116476.1-201ENSMUST00000226274 2318 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Gm44620-201ENSMUST00000209183 2887 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Gm13106-201ENSMUST00000119045 1443 ntBASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Gm14248-201ENSMUST00000117790 544 ntBASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Gm11746-201ENSMUST00000119843 821 ntBASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Gm14990-201ENSMUST00000122354 445 ntBASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Mir1903-201ENSMUST00000122574 80 ntBASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Gm24893-201ENSMUST00000122745 369 ntBASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Gm22948-201ENSMUST00000158561 243 ntBASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Gm18709-201ENSMUST00000180564 489 ntBASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Gm5181-201ENSMUST00000183140 971 ntBASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Dlx6os1-204ENSMUST00000184182 146 ntBASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Gm8151-201ENSMUST00000184817 871 ntBASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Gm37771-201ENSMUST00000193121 265 ntBASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Gm38334-201ENSMUST00000195060 313 ntBASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Gm37585-201ENSMUST00000195440 280 ntBASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Gm22149-202ENSMUST00000196259 137 ntBASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Gm44971-201ENSMUST00000206192 337 ntBASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 AC134439.2-201ENSMUST00000221950 467 ntBASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 AC157571.1-201ENSMUST00000222014 520 ntBASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Gm5374-201ENSMUST00000222868 657 ntBASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 AC167669.3-201ENSMUST00000224720 393 ntBASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Snora9-201ENSMUST00000082579 133 ntBASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Gm24150-201ENSMUST00000082759 104 ntBASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Gm45183-201ENSMUST00000207937 1497 ntBASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Gm38082-201ENSMUST00000192800 6882 ntBASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Pcdh1F7BJK1 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm43128-201ENSMUST00000202212 1621 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm14751-201ENSMUST00000117693 222 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm12189-201ENSMUST00000119779 912 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm13808-201ENSMUST00000121353 184 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Defa-ps10-201ENSMUST00000121649 171 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Gm6245-201ENSMUST00000164699 768 ntBASIC6.18□□□□□ -1.42
Pcdh1F7BJK1 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms