Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 GH2-201ENST00000332800 1138 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SLC1A1P43005 IL19-202ENST00000340758 1032 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SLC1A1P43005 DMRTC1B-202ENST00000373532 1100 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
SLC1A1P43005 U3.24-201ENST00000391177 215 ntBASIC10.01□□□□□ -0.81
SLC1A1P43005 AC015977.2-201ENST00000420852 567 ntTSL 3 BASIC10.01□□□□□ -0.81
SLC1A1P43005 AC017053.1-201ENST00000425125 579 ntTSL 4 BASIC10.01□□□□□ -0.81
SLC1A1P43005 AC092042.3-203ENST00000443313 950 ntTSL 2 BASIC10.01□□□□□ -0.81
SLC1A1P43005 AL662791.2-201ENST00000455287 596 ntBASIC10.01□□□□□ -0.81
SLC1A1P43005 RN7SL320P-201ENST00000484133 295 ntBASIC10.01□□□□□ -0.81
SLC1A1P43005 AC011447.1-201ENST00000497576 441 ntBASIC10.01□□□□□ -0.81
SLC1A1P43005 LINC02056-203ENST00000512573 594 ntTSL 3 BASIC10.01□□□□□ -0.81
SLC1A1P43005 IGLVV-58-201ENST00000520445 304 ntBASIC10.01□□□□□ -0.81
SLC1A1P43005 ATP5J2P5-201ENST00000537967 258 ntBASIC10.01□□□□□ -0.81
SLC1A1P43005 RRN3P1-203ENST00000551681 1151 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SLC1A1P43005 AC006146.1-201ENST00000557304 693 ntTSL 5 BASIC10.01□□□□□ -0.81
SLC1A1P43005 AC092718.2-201ENST00000562315 487 ntTSL 3 BASIC10.01□□□□□ -0.81
SLC1A1P43005 AC009060.2-201ENST00000569264 106 ntBASIC10.01□□□□□ -0.81
SLC1A1P43005 AC015688.7-201ENST00000580276 664 ntBASIC10.01□□□□□ -0.81
SLC1A1P43005 ZNF814-208ENST00000596604 528 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SLC1A1P43005 AC134879.2-201ENST00000604178 389 ntBASIC10.01□□□□□ -0.81
SLC1A1P43005 AC007216.5-201ENST00000612457 109 ntBASIC10.01□□□□□ -0.81
SLC1A1P43005 Metazoa_SRP.133-201ENST00000612964 317 ntBASIC10.01□□□□□ -0.81
SLC1A1P43005 PSG3-206ENST00000614582 1287 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
SLC1A1P43005 AC138932.4-201ENST00000619102 109 ntBASIC10.01□□□□□ -0.81
SLC1A1P43005 AC145285.8-201ENST00000619561 255 ntBASIC10.01□□□□□ -0.81
SLC1A1P43005 AC138969.4-201ENST00000620593 109 ntBASIC10.01□□□□□ -0.81
SLC1A1P43005 AC025279.3-201ENST00000622398 104 ntBASIC10.01□□□□□ -0.81
SLC1A1P43005 AC135068.9-201ENST00000628927 355 ntBASIC10.01□□□□□ -0.81
SLC1A1P43005 AL603840.1-202ENST00000634769 583 ntTSL 5 BASIC10.01□□□□□ -0.81
SLC1A1P43005 AC183088.2-201ENST00000637451 883 ntBASIC10.01□□□□□ -0.81
SLC1A1P43005 OR10H3-202ENST00000641646 1029 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
SLC1A1P43005 BLOC1S6-218ENST00000568816 4013 ntTSL 2 BASIC10.01□□□□□ -0.81
SLC1A1P43005 C11orf57-201ENST00000280352 3693 ntAPPRIS ALT1 TSL 2 BASIC10.01□□□□□ -0.81
SLC1A1P43005 AGBL3-203ENST00000436302 3533 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
SLC1A1P43005 CHAC2-201ENST00000295304 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SLC1A1P43005 TPM1-233ENST00000610733 3957 ntTSL 2 BASIC10.01□□□□□ -0.81
SLC1A1P43005 AC139495.3-201ENST00000515156 4437 ntBASIC10.01□□□□□ -0.81
SLC1A1P43005 MTF2-213ENST00000540243 3845 ntTSL 2 BASIC10.01□□□□□ -0.81
SLC1A1P43005 KRBA2-201ENST00000331336 1964 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SLC1A1P43005 AL391988.1-201ENST00000614747 1553 ntBASIC10.01□□□□□ -0.81
SLC1A1P43005 SLC8A1-202ENST00000402441 3065 ntTSL 2 BASIC10.01□□□□□ -0.81
SLC1A1P43005 AC114689.1-201ENST00000578727 2484 ntBASIC10□□□□□ -0.81
SLC1A1P43005 ZNF322-208ENST00000622479 4882 ntAPPRIS P1 TSL 4 BASIC10□□□□□ -0.81
SLC1A1P43005 KBTBD11-OT1-204ENST00000635855 6169 ntAPPRIS P5 TSL 5 BASIC10□□□□□ -0.81
SLC1A1P43005 TARS-202ENST00000455217 2523 ntTSL 2 BASIC10□□□□□ -0.81
SLC1A1P43005 SNX19P2-201ENST00000452841 2971 ntBASIC10□□□□□ -0.81
SLC1A1P43005 ZBTB43-201ENST00000373457 5695 ntAPPRIS P1 BASIC10□□□□□ -0.81
SLC1A1P43005 COL10A1-201ENST00000243222 3289 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SLC1A1P43005 AL137025.1-201ENST00000436932 2378 ntTSL 2 BASIC10□□□□□ -0.81
SLC1A1P43005 NFATC2IP-203ENST00000564978 2350 ntTSL 1 (best) BASIC10□□□□□ -0.81
SLC1A1P43005 TMPRSS4-220ENST00000618855 3531 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
SLC1A1P43005 LAMB4-203ENST00000418464 2600 ntTSL 1 (best) BASIC10□□□□□ -0.81
SLC1A1P43005 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC10□□□□□ -0.81
SLC1A1P43005 NDUFS4-201ENST00000296684 675 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SLC1A1P43005 H2AFV-203ENST00000349299 596 ntTSL 2 BASIC10□□□□□ -0.81
SLC1A1P43005 ACYP1-202ENST00000357971 650 ntTSL 3 BASIC10□□□□□ -0.81
SLC1A1P43005 PRPS1-201ENST00000372418 942 ntTSL 3 BASIC10□□□□□ -0.81
SLC1A1P43005 LINC02271-201ENST00000398777 546 ntTSL 4 BASIC10□□□□□ -0.81
SLC1A1P43005 RPL17P10-201ENST00000416091 555 ntBASIC10□□□□□ -0.81
SLC1A1P43005 IFIT6P-201ENST00000418257 1194 ntBASIC10□□□□□ -0.81
SLC1A1P43005 MAP4-207ENST00000426837 8920 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
SLC1A1P43005 AP000281.2-201ENST00000427911 384 ntTSL 3 BASIC10□□□□□ -0.81
SLC1A1P43005 CBWD5-208ENST00000429800 1234 ntTSL 2 BASIC10□□□□□ -0.81
SLC1A1P43005 AL354892.1-201ENST00000430250 335 ntTSL 3 BASIC10□□□□□ -0.81
SLC1A1P43005 LINC02020-204ENST00000435548 604 ntTSL 4 BASIC10□□□□□ -0.81
SLC1A1P43005 AL162584.1-201ENST00000437097 633 ntTSL 3 BASIC10□□□□□ -0.81
SLC1A1P43005 IGKV1D-39-201ENST00000448155 376 ntAPPRIS P1 BASIC10□□□□□ -0.81
SLC1A1P43005 ARL17B-202ENST00000450673 743 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
SLC1A1P43005 AL596087.2-201ENST00000451784 484 ntTSL 3 BASIC10□□□□□ -0.81
SLC1A1P43005 AL020996.1-202ENST00000453649 517 ntTSL 3 BASIC10□□□□□ -0.81
SLC1A1P43005 AC013472.1-202ENST00000455081 558 ntTSL 3 BASIC10□□□□□ -0.81
SLC1A1P43005 BX322234.2-201ENST00000457833 654 ntTSL 3 BASIC10□□□□□ -0.81
SLC1A1P43005 AL135902.1-201ENST00000458017 384 ntTSL 5 BASIC10□□□□□ -0.81
SLC1A1P43005 IGKV1-6-201ENST00000464162 380 ntAPPRIS P1 BASIC10□□□□□ -0.81
SLC1A1P43005 ENO1P3-201ENST00000484903 1224 ntBASIC10□□□□□ -0.81
SLC1A1P43005 RPL6P8-201ENST00000490136 843 ntBASIC10□□□□□ -0.81
SLC1A1P43005 IGKV1-9-201ENST00000493819 409 ntAPPRIS P1 BASIC10□□□□□ -0.81
SLC1A1P43005 IGKV1-5-201ENST00000496168 532 ntAPPRIS P1 BASIC10□□□□□ -0.81
SLC1A1P43005 SNRPCP16-201ENST00000506029 210 ntBASIC10□□□□□ -0.81
SLC1A1P43005 LINC02219-201ENST00000520762 454 ntTSL 2 BASIC10□□□□□ -0.81
SLC1A1P43005 AC016877.2-201ENST00000522128 1069 ntBASIC10□□□□□ -0.81
SLC1A1P43005 TUBB4BP4-201ENST00000527023 304 ntBASIC10□□□□□ -0.81
SLC1A1P43005 ACYP1-203ENST00000553302 606 ntTSL 2 BASIC10□□□□□ -0.81
SLC1A1P43005 AL390254.1-201ENST00000554033 465 ntTSL 5 BASIC10□□□□□ -0.81
SLC1A1P43005 AL359792.1-201ENST00000554046 385 ntTSL 3 BASIC10□□□□□ -0.81
SLC1A1P43005 LYSMD2-203ENST00000558126 775 ntTSL 5 BASIC10□□□□□ -0.81
SLC1A1P43005 MESTP2-201ENST00000559787 889 ntBASIC10□□□□□ -0.81
SLC1A1P43005 ANAPC11-205ENST00000571570 581 ntAPPRIS P1 TSL 3 BASIC10□□□□□ -0.81
SLC1A1P43005 AC116914.1-201ENST00000575043 398 ntTSL 2 BASIC10□□□□□ -0.81
SLC1A1P43005 AC134407.1-201ENST00000577385 709 ntTSL 3 BASIC10□□□□□ -0.81
SLC1A1P43005 TRBV7-9-201ENST00000612787 347 ntAPPRIS P1 BASIC10□□□□□ -0.81
SLC1A1P43005 Metazoa_SRP.119-201ENST00000613387 291 ntBASIC10□□□□□ -0.81
SLC1A1P43005 ARL17B-208ENST00000622877 565 ntTSL 4 BASIC10□□□□□ -0.81
SLC1A1P43005 PCBP1-AS1-320ENST00000627918 1146 ntTSL 5 BASIC10□□□□□ -0.81
SLC1A1P43005 ABCC9-207ENST00000636888 1023 ntTSL 5 BASIC10□□□□□ -0.81
SLC1A1P43005 GALK2-203ENST00000544523 1950 ntTSL 2 BASIC10□□□□□ -0.81
SLC1A1P43005 SH3YL1-229ENST00000626873 1973 ntTSL 5 BASIC10□□□□□ -0.81
SLC1A1P43005 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SLC1A1P43005 ADGRG6-203ENST00000367608 6879 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
SLC1A1P43005 CA5B-204ENST00000454127 2205 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 360.5 ms