Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
SNX11Q9Y5W9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX11Q9Y5W9 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNX11Q9Y5W9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.53■□□□□ 0.88
SNX11Q9Y5W9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNX11Q9Y5W9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNX11Q9Y5W9 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNX11Q9Y5W9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
SNX11Q9Y5W9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.52■□□□□ 0.88
SNX11Q9Y5W9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNX11Q9Y5W9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.52■□□□□ 0.88
SNX11Q9Y5W9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SNX11Q9Y5W9 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SNX11Q9Y5W9 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.52■□□□□ 0.88
SNX11Q9Y5W9 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.52■□□□□ 0.88
SNX11Q9Y5W9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNX11Q9Y5W9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SNX11Q9Y5W9 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.52■□□□□ 0.88
SNX11Q9Y5W9 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SNX11Q9Y5W9 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.52■□□□□ 0.88
SNX11Q9Y5W9 AC100791.3-201ENST00000617619 330 ntBASIC20.52■□□□□ 0.88
SNX11Q9Y5W9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.52■□□□□ 0.88
SNX11Q9Y5W9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.52■□□□□ 0.88
SNX11Q9Y5W9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SNX11Q9Y5W9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.87
SNX11Q9Y5W9 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
SNX11Q9Y5W9 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SNX11Q9Y5W9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNX11Q9Y5W9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.51■□□□□ 0.87
SNX11Q9Y5W9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNX11Q9Y5W9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SNX11Q9Y5W9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.51■□□□□ 0.87
SNX11Q9Y5W9 AC008403.3-201ENST00000598924 454 ntBASIC20.51■□□□□ 0.87
SNX11Q9Y5W9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SNX11Q9Y5W9 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SNX11Q9Y5W9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNX11Q9Y5W9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNX11Q9Y5W9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.5■□□□□ 0.87
SNX11Q9Y5W9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNX11Q9Y5W9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
SNX11Q9Y5W9 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNX11Q9Y5W9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNX11Q9Y5W9 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
SNX11Q9Y5W9 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNX11Q9Y5W9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.5■□□□□ 0.87
SNX11Q9Y5W9 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNX11Q9Y5W9 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.5■□□□□ 0.87
SNX11Q9Y5W9 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.5■□□□□ 0.87
SNX11Q9Y5W9 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNX11Q9Y5W9 AC060766.5-201ENST00000590539 871 ntBASIC20.5■□□□□ 0.87
SNX11Q9Y5W9 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SNX11Q9Y5W9 AC026471.6-201ENST00000622954 1905 ntBASIC20.5■□□□□ 0.87
SNX11Q9Y5W9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNX11Q9Y5W9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNX11Q9Y5W9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX11Q9Y5W9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SNX11Q9Y5W9 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX11Q9Y5W9 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SNX11Q9Y5W9 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX11Q9Y5W9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.49■□□□□ 0.87
SNX11Q9Y5W9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
SNX11Q9Y5W9 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX11Q9Y5W9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX11Q9Y5W9 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SNX11Q9Y5W9 C11orf96-202ENST00000528572 1834 ntBASIC20.49■□□□□ 0.87
SNX11Q9Y5W9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNX11Q9Y5W9 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX11Q9Y5W9 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX11Q9Y5W9 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SNX11Q9Y5W9 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.49■□□□□ 0.87
SNX11Q9Y5W9 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.49■□□□□ 0.87
SNX11Q9Y5W9 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
SNX11Q9Y5W9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNX11Q9Y5W9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNX11Q9Y5W9 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX11Q9Y5W9 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SNX11Q9Y5W9 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX11Q9Y5W9 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
SNX11Q9Y5W9 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNX11Q9Y5W9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SNX11Q9Y5W9 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNX11Q9Y5W9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
SNX11Q9Y5W9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNX11Q9Y5W9 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNX11Q9Y5W9 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SNX11Q9Y5W9 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.48■□□□□ 0.87
SNX11Q9Y5W9 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNX11Q9Y5W9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SNX11Q9Y5W9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.48■□□□□ 0.87
SNX11Q9Y5W9 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNX11Q9Y5W9 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNX11Q9Y5W9 AL589743.5-201ENST00000616611 1050 ntBASIC20.48■□□□□ 0.87
SNX11Q9Y5W9 HLA-B-256ENST00000639848 1089 ntBASIC20.48■□□□□ 0.87
SNX11Q9Y5W9 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNX11Q9Y5W9 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.48■□□□□ 0.87
SNX11Q9Y5W9 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNX11Q9Y5W9 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SNX11Q9Y5W9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNX11Q9Y5W9 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNX11Q9Y5W9 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms