Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
C12orf4Q9NQ89 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C12orf4Q9NQ89 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
C12orf4Q9NQ89 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
C12orf4Q9NQ89 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C12orf4Q9NQ89 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
C12orf4Q9NQ89 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.86■□□□□ 0.45
C12orf4Q9NQ89 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C12orf4Q9NQ89 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
C12orf4Q9NQ89 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
C12orf4Q9NQ89 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C12orf4Q9NQ89 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C12orf4Q9NQ89 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C12orf4Q9NQ89 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C12orf4Q9NQ89 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
C12orf4Q9NQ89 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
C12orf4Q9NQ89 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
C12orf4Q9NQ89 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
C12orf4Q9NQ89 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.85■□□□□ 0.45
C12orf4Q9NQ89 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
C12orf4Q9NQ89 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.85■□□□□ 0.45
C12orf4Q9NQ89 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
C12orf4Q9NQ89 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
C12orf4Q9NQ89 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
C12orf4Q9NQ89 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
C12orf4Q9NQ89 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
C12orf4Q9NQ89 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.85■□□□□ 0.45
C12orf4Q9NQ89 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
C12orf4Q9NQ89 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.84■□□□□ 0.45
C12orf4Q9NQ89 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
C12orf4Q9NQ89 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C12orf4Q9NQ89 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.84■□□□□ 0.45
C12orf4Q9NQ89 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C12orf4Q9NQ89 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.84■□□□□ 0.45
C12orf4Q9NQ89 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C12orf4Q9NQ89 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.84■□□□□ 0.45
C12orf4Q9NQ89 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
C12orf4Q9NQ89 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
C12orf4Q9NQ89 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C12orf4Q9NQ89 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.84■□□□□ 0.45
C12orf4Q9NQ89 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
C12orf4Q9NQ89 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
C12orf4Q9NQ89 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
C12orf4Q9NQ89 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.84■□□□□ 0.45
C12orf4Q9NQ89 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.84■□□□□ 0.45
C12orf4Q9NQ89 AL512631.2-201ENST00000604634 923 ntBASIC17.84■□□□□ 0.45
C12orf4Q9NQ89 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C12orf4Q9NQ89 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.84■□□□□ 0.45
C12orf4Q9NQ89 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C12orf4Q9NQ89 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C12orf4Q9NQ89 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
C12orf4Q9NQ89 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C12orf4Q9NQ89 HCG11-201ENST00000411553 5696 ntBASIC17.84■□□□□ 0.45
C12orf4Q9NQ89 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
C12orf4Q9NQ89 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.84■□□□□ 0.45
C12orf4Q9NQ89 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
C12orf4Q9NQ89 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
C12orf4Q9NQ89 AP004607.7-201ENST00000527152 1677 ntBASIC17.83■□□□□ 0.45
C12orf4Q9NQ89 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
C12orf4Q9NQ89 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
C12orf4Q9NQ89 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
C12orf4Q9NQ89 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
C12orf4Q9NQ89 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
C12orf4Q9NQ89 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.83■□□□□ 0.44
C12orf4Q9NQ89 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.83■□□□□ 0.44
C12orf4Q9NQ89 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
C12orf4Q9NQ89 DUX4L19-201ENST00000557448 1267 ntBASIC17.83■□□□□ 0.44
C12orf4Q9NQ89 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.83■□□□□ 0.44
C12orf4Q9NQ89 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
C12orf4Q9NQ89 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
C12orf4Q9NQ89 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
C12orf4Q9NQ89 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
C12orf4Q9NQ89 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
C12orf4Q9NQ89 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
C12orf4Q9NQ89 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.83■□□□□ 0.44
C12orf4Q9NQ89 SYT6-210ENST00000641643 1587 ntBASIC17.83■□□□□ 0.44
C12orf4Q9NQ89 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
C12orf4Q9NQ89 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
C12orf4Q9NQ89 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.83■□□□□ 0.44
C12orf4Q9NQ89 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
C12orf4Q9NQ89 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
C12orf4Q9NQ89 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C12orf4Q9NQ89 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
C12orf4Q9NQ89 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
C12orf4Q9NQ89 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.82■□□□□ 0.44
C12orf4Q9NQ89 AC003102.1-202ENST00000563394 1796 ntBASIC17.82■□□□□ 0.44
C12orf4Q9NQ89 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
C12orf4Q9NQ89 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
C12orf4Q9NQ89 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
C12orf4Q9NQ89 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C12orf4Q9NQ89 AP005435.1-201ENST00000529293 1178 ntBASIC17.82■□□□□ 0.44
C12orf4Q9NQ89 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.82■□□□□ 0.44
C12orf4Q9NQ89 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
C12orf4Q9NQ89 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.82■□□□□ 0.44
C12orf4Q9NQ89 AC136469.2-201ENST00000623944 1028 ntBASIC17.82■□□□□ 0.44
C12orf4Q9NQ89 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
C12orf4Q9NQ89 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
C12orf4Q9NQ89 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C12orf4Q9NQ89 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
C12orf4Q9NQ89 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms