Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATXN3LQ9H3M9 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.74■■□□□ 1.07
ATXN3LQ9H3M9 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATXN3LQ9H3M9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATXN3LQ9H3M9 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATXN3LQ9H3M9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.74■■□□□ 1.07
ATXN3LQ9H3M9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATXN3LQ9H3M9 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATXN3LQ9H3M9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
ATXN3LQ9H3M9 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATXN3LQ9H3M9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATXN3LQ9H3M9 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATXN3LQ9H3M9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.73■■□□□ 1.07
ATXN3LQ9H3M9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.73■■□□□ 1.07
ATXN3LQ9H3M9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.73■■□□□ 1.07
ATXN3LQ9H3M9 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.73■■□□□ 1.07
ATXN3LQ9H3M9 AC008687.6-201ENST00000596318 630 ntBASIC21.73■■□□□ 1.07
ATXN3LQ9H3M9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.73■■□□□ 1.07
ATXN3LQ9H3M9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATXN3LQ9H3M9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATXN3LQ9H3M9 KRT17P1-201ENST00000399211 1546 ntBASIC21.73■■□□□ 1.07
ATXN3LQ9H3M9 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.73■■□□□ 1.07
ATXN3LQ9H3M9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATXN3LQ9H3M9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.73■■□□□ 1.07
ATXN3LQ9H3M9 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATXN3LQ9H3M9 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATXN3LQ9H3M9 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ATXN3LQ9H3M9 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ATXN3LQ9H3M9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATXN3LQ9H3M9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATXN3LQ9H3M9 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
ATXN3LQ9H3M9 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATXN3LQ9H3M9 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
ATXN3LQ9H3M9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ATXN3LQ9H3M9 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.72■■□□□ 1.07
ATXN3LQ9H3M9 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATXN3LQ9H3M9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ATXN3LQ9H3M9 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATXN3LQ9H3M9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATXN3LQ9H3M9 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATXN3LQ9H3M9 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATXN3LQ9H3M9 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATXN3LQ9H3M9 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.71■■□□□ 1.07
ATXN3LQ9H3M9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.71■■□□□ 1.07
ATXN3LQ9H3M9 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.71■■□□□ 1.07
ATXN3LQ9H3M9 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.71■■□□□ 1.07
ATXN3LQ9H3M9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.71■■□□□ 1.07
ATXN3LQ9H3M9 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.71■■□□□ 1.07
ATXN3LQ9H3M9 CYP2T3P-201ENST00000601990 817 ntBASIC21.71■■□□□ 1.07
ATXN3LQ9H3M9 AC100791.3-201ENST00000617619 330 ntBASIC21.71■■□□□ 1.07
ATXN3LQ9H3M9 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.71■■□□□ 1.07
ATXN3LQ9H3M9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATXN3LQ9H3M9 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATXN3LQ9H3M9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.71■■□□□ 1.07
ATXN3LQ9H3M9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ATXN3LQ9H3M9 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATXN3LQ9H3M9 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATXN3LQ9H3M9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATXN3LQ9H3M9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ATXN3LQ9H3M9 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATXN3LQ9H3M9 ESRRAP1-201ENST00000400596 1257 ntBASIC21.7■■□□□ 1.06
ATXN3LQ9H3M9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.7■■□□□ 1.06
ATXN3LQ9H3M9 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
ATXN3LQ9H3M9 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.7■■□□□ 1.06
ATXN3LQ9H3M9 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.7■■□□□ 1.06
ATXN3LQ9H3M9 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ATXN3LQ9H3M9 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.7■■□□□ 1.06
ATXN3LQ9H3M9 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.7■■□□□ 1.06
ATXN3LQ9H3M9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
ATXN3LQ9H3M9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATXN3LQ9H3M9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.7■■□□□ 1.06
ATXN3LQ9H3M9 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATXN3LQ9H3M9 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATXN3LQ9H3M9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
ATXN3LQ9H3M9 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.69■■□□□ 1.06
ATXN3LQ9H3M9 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATXN3LQ9H3M9 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATXN3LQ9H3M9 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATXN3LQ9H3M9 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.69■■□□□ 1.06
ATXN3LQ9H3M9 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.69■■□□□ 1.06
ATXN3LQ9H3M9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
ATXN3LQ9H3M9 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.69■■□□□ 1.06
ATXN3LQ9H3M9 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
ATXN3LQ9H3M9 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATXN3LQ9H3M9 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATXN3LQ9H3M9 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATXN3LQ9H3M9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATXN3LQ9H3M9 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATXN3LQ9H3M9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATXN3LQ9H3M9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATXN3LQ9H3M9 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ATXN3LQ9H3M9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATXN3LQ9H3M9 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.68■■□□□ 1.06
ATXN3LQ9H3M9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.68■■□□□ 1.06
ATXN3LQ9H3M9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATXN3LQ9H3M9 AC007322.3-201ENST00000426526 701 ntBASIC21.68■■□□□ 1.06
ATXN3LQ9H3M9 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.68■■□□□ 1.06
ATXN3LQ9H3M9 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.68■■□□□ 1.06
ATXN3LQ9H3M9 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
ATXN3LQ9H3M9 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms