Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Raf1Q99N57 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Raf1Q99N57 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Raf1Q99N57 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Raf1Q99N57 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Raf1Q99N57 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
Raf1Q99N57 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Raf1Q99N57 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Raf1Q99N57 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Raf1Q99N57 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Raf1Q99N57 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Raf1Q99N57 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Raf1Q99N57 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.17■□□□□ 0.18
Raf1Q99N57 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Raf1Q99N57 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Raf1Q99N57 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Raf1Q99N57 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Raf1Q99N57 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Raf1Q99N57 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Raf1Q99N57 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.16■□□□□ 0.18
Raf1Q99N57 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Raf1Q99N57 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Raf1Q99N57 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Raf1Q99N57 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.16■□□□□ 0.18
Raf1Q99N57 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Raf1Q99N57 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Raf1Q99N57 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Raf1Q99N57 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Raf1Q99N57 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Raf1Q99N57 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Raf1Q99N57 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Raf1Q99N57 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Raf1Q99N57 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Raf1Q99N57 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Raf1Q99N57 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Raf1Q99N57 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.15■□□□□ 0.18
Raf1Q99N57 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Raf1Q99N57 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Raf1Q99N57 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Raf1Q99N57 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Raf1Q99N57 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Raf1Q99N57 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.15■□□□□ 0.18
Raf1Q99N57 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Raf1Q99N57 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Raf1Q99N57 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Raf1Q99N57 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.15■□□□□ 0.18
Raf1Q99N57 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Raf1Q99N57 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Raf1Q99N57 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Raf1Q99N57 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Raf1Q99N57 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Raf1Q99N57 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Raf1Q99N57 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Raf1Q99N57 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Raf1Q99N57 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Raf1Q99N57 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Raf1Q99N57 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Raf1Q99N57 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Raf1Q99N57 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Raf1Q99N57 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Raf1Q99N57 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Raf1Q99N57 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Raf1Q99N57 Gm27801-201ENSMUST00000184174 223 ntBASIC16.14■□□□□ 0.17
Raf1Q99N57 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.14■□□□□ 0.17
Raf1Q99N57 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.14■□□□□ 0.17
Raf1Q99N57 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Raf1Q99N57 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Raf1Q99N57 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Raf1Q99N57 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Raf1Q99N57 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Raf1Q99N57 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Raf1Q99N57 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Raf1Q99N57 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.14■□□□□ 0.17
Raf1Q99N57 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.14■□□□□ 0.17
Raf1Q99N57 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.14■□□□□ 0.17
Raf1Q99N57 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Raf1Q99N57 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Raf1Q99N57 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raf1Q99N57 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raf1Q99N57 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.13■□□□□ 0.17
Raf1Q99N57 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raf1Q99N57 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raf1Q99N57 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.13■□□□□ 0.17
Raf1Q99N57 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raf1Q99N57 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raf1Q99N57 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Raf1Q99N57 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raf1Q99N57 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Raf1Q99N57 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.13■□□□□ 0.17
Raf1Q99N57 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Raf1Q99N57 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.13■□□□□ 0.17
Raf1Q99N57 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raf1Q99N57 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Raf1Q99N57 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raf1Q99N57 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raf1Q99N57 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Raf1Q99N57 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.13■□□□□ 0.17
Raf1Q99N57 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raf1Q99N57 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.13■□□□□ 0.17
Raf1Q99N57 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms