Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.82■□□□□ 0.28
ZNF48Q96MX3 FAM99A-202ENST00000538190 1989 ntBASIC16.82■□□□□ 0.28
ZNF48Q96MX3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF48Q96MX3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.82■□□□□ 0.28
ZNF48Q96MX3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF48Q96MX3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
ZNF48Q96MX3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF48Q96MX3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ZNF48Q96MX3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF48Q96MX3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF48Q96MX3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF48Q96MX3 AC091799.1-201ENST00000422823 811 ntBASIC16.82■□□□□ 0.28
ZNF48Q96MX3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.82■□□□□ 0.28
ZNF48Q96MX3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ZNF48Q96MX3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF48Q96MX3 AC093827.2-201ENST00000512654 315 ntBASIC16.82■□□□□ 0.28
ZNF48Q96MX3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.82■□□□□ 0.28
ZNF48Q96MX3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ZNF48Q96MX3 FBXW4P1-201ENST00000426721 2239 ntBASIC16.82■□□□□ 0.28
ZNF48Q96MX3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
ZNF48Q96MX3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF48Q96MX3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF48Q96MX3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF48Q96MX3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF48Q96MX3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ZNF48Q96MX3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF48Q96MX3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
ZNF48Q96MX3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF48Q96MX3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ZNF48Q96MX3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF48Q96MX3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF48Q96MX3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.81■□□□□ 0.28
ZNF48Q96MX3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF48Q96MX3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF48Q96MX3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.81■□□□□ 0.28
ZNF48Q96MX3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF48Q96MX3 ESRRAP1-201ENST00000400596 1257 ntBASIC16.81■□□□□ 0.28
ZNF48Q96MX3 AL355472.2-201ENST00000422958 438 ntBASIC16.81■□□□□ 0.28
ZNF48Q96MX3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.81■□□□□ 0.28
ZNF48Q96MX3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.81■□□□□ 0.28
ZNF48Q96MX3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.81■□□□□ 0.28
ZNF48Q96MX3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.81■□□□□ 0.28
ZNF48Q96MX3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.81■□□□□ 0.28
ZNF48Q96MX3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF48Q96MX3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.81■□□□□ 0.28
ZNF48Q96MX3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF48Q96MX3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ZNF48Q96MX3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF48Q96MX3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.81■□□□□ 0.28
ZNF48Q96MX3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF48Q96MX3 AL121603.2-201ENST00000557373 2117 ntBASIC16.81■□□□□ 0.28
ZNF48Q96MX3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ZNF48Q96MX3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF48Q96MX3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF48Q96MX3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ZNF48Q96MX3 AC244015.2-201ENST00000616358 1861 ntBASIC16.8■□□□□ 0.28
ZNF48Q96MX3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF48Q96MX3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF48Q96MX3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
ZNF48Q96MX3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF48Q96MX3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ZNF48Q96MX3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF48Q96MX3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ZNF48Q96MX3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC16.8■□□□□ 0.28
ZNF48Q96MX3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF48Q96MX3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF48Q96MX3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ZNF48Q96MX3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF48Q96MX3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.8■□□□□ 0.28
ZNF48Q96MX3 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.8■□□□□ 0.28
ZNF48Q96MX3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.8■□□□□ 0.28
ZNF48Q96MX3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.8■□□□□ 0.28
ZNF48Q96MX3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
ZNF48Q96MX3 AC098590.1-201ENST00000468126 897 ntBASIC16.8■□□□□ 0.28
ZNF48Q96MX3 RPS2P52-201ENST00000469610 820 ntBASIC16.8■□□□□ 0.28
ZNF48Q96MX3 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.8■□□□□ 0.28
ZNF48Q96MX3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ZNF48Q96MX3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.8■□□□□ 0.28
ZNF48Q96MX3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.8■□□□□ 0.28
ZNF48Q96MX3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.8■□□□□ 0.28
ZNF48Q96MX3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF48Q96MX3 KRT17P1-201ENST00000399211 1546 ntBASIC16.8■□□□□ 0.28
ZNF48Q96MX3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF48Q96MX3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF48Q96MX3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF48Q96MX3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF48Q96MX3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ZNF48Q96MX3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.79■□□□□ 0.28
ZNF48Q96MX3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
ZNF48Q96MX3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ZNF48Q96MX3 LSM12P1-201ENST00000411836 588 ntBASIC16.79■□□□□ 0.28
ZNF48Q96MX3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.79■□□□□ 0.28
ZNF48Q96MX3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.79■□□□□ 0.28
ZNF48Q96MX3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF48Q96MX3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.79■□□□□ 0.28
ZNF48Q96MX3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.79■□□□□ 0.28
ZNF48Q96MX3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.79■□□□□ 0.28
ZNF48Q96MX3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF48Q96MX3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF48Q96MX3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms