Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh19Q80TF3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh19Q80TF3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pcdh19Q80TF3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh19Q80TF3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pcdh19Q80TF3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.74■□□□□ 0.43
Pcdh19Q80TF3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh19Q80TF3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pcdh19Q80TF3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh19Q80TF3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh19Q80TF3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh19Q80TF3 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh19Q80TF3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Pcdh19Q80TF3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh19Q80TF3 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.73■□□□□ 0.43
Pcdh19Q80TF3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdh19Q80TF3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh19Q80TF3 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh19Q80TF3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdh19Q80TF3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh19Q80TF3 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh19Q80TF3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh19Q80TF3 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh19Q80TF3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh19Q80TF3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh19Q80TF3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh19Q80TF3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh19Q80TF3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh19Q80TF3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh19Q80TF3 BC021767-201ENSMUST00000126387 1716 ntBASIC17.72■□□□□ 0.43
Pcdh19Q80TF3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh19Q80TF3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh19Q80TF3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh19Q80TF3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh19Q80TF3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh19Q80TF3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh19Q80TF3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh19Q80TF3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.72■□□□□ 0.43
Pcdh19Q80TF3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.72■□□□□ 0.43
Pcdh19Q80TF3 Mtag2-201ENSMUST00000058665 714 ntBASIC17.72■□□□□ 0.43
Pcdh19Q80TF3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh19Q80TF3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh19Q80TF3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh19Q80TF3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh19Q80TF3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Pcdh19Q80TF3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh19Q80TF3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pcdh19Q80TF3 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.72■□□□□ 0.43
Pcdh19Q80TF3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh19Q80TF3 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Pcdh19Q80TF3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh19Q80TF3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh19Q80TF3 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.71■□□□□ 0.43
Pcdh19Q80TF3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh19Q80TF3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.71■□□□□ 0.43
Pcdh19Q80TF3 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh19Q80TF3 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.71■□□□□ 0.43
Pcdh19Q80TF3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdh19Q80TF3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh19Q80TF3 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.71■□□□□ 0.43
Pcdh19Q80TF3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
Pcdh19Q80TF3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdh19Q80TF3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdh19Q80TF3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdh19Q80TF3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdh19Q80TF3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh19Q80TF3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Pcdh19Q80TF3 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh19Q80TF3 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.7■□□□□ 0.42
Pcdh19Q80TF3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh19Q80TF3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh19Q80TF3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh19Q80TF3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh19Q80TF3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Pcdh19Q80TF3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh19Q80TF3 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh19Q80TF3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.7■□□□□ 0.42
Pcdh19Q80TF3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh19Q80TF3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh19Q80TF3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Pcdh19Q80TF3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pcdh19Q80TF3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh19Q80TF3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pcdh19Q80TF3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh19Q80TF3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh19Q80TF3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh19Q80TF3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh19Q80TF3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh19Q80TF3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh19Q80TF3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh19Q80TF3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh19Q80TF3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.69■□□□□ 0.42
Pcdh19Q80TF3 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh19Q80TF3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh19Q80TF3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh19Q80TF3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pcdh19Q80TF3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh19Q80TF3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh19Q80TF3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.69■□□□□ 0.42
Pcdh19Q80TF3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms