Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 FAM133B-206ENST00000468931 189 ntTSL 513.26□□□□□ -0.292e-6■■■□□ 15.4
LSM11P83369 WARS-222ENST00000555063 573 ntTSL 213.14□□□□□ -0.312e-6■■■□□ 15.4
LSM11P83369 SMAD5-206ENST00000509962 547 ntTSL 413□□□□□ -0.332e-6■■■□□ 15.4
LSM11P83369 NABP1-207ENST00000451500 2015 ntTSL 512.95□□□□□ -0.341e-11■■■□□ 15.4
LSM11P83369 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.352e-6■■■□□ 15.4
LSM11P83369 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.354e-46■■■□□ 15.4
LSM11P83369 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.352e-6■■■□□ 15.4
LSM11P83369 SAT2-202ENST00000380466 974 ntTSL 1 (best)12.71□□□□□ -0.372e-7■■■□□ 15.4
LSM11P83369 LMBR1L-220ENST00000551272 472 ntTSL 212.68□□□□□ -0.382e-6■■■□□ 15.4
LSM11P83369 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.382e-6■■■□□ 15.4
LSM11P83369 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.422e-6■■■□□ 15.4
LSM11P83369 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.422e-6■■■□□ 15.4
LSM11P83369 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.38□□□□□ -0.432e-6■■■□□ 15.4
LSM11P83369 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.432e-6■■■□□ 15.4
LSM11P83369 FAM133B-208ENST00000481407 2293 ntTSL 212.32□□□□□ -0.442e-6■■■□□ 15.4
LSM11P83369 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.452e-6■■■□□ 15.4
LSM11P83369 PPM1D-203ENST00000590418 489 ntTSL 412.21□□□□□ -0.452e-6■■■□□ 15.4
LSM11P83369 YY1AP1-220ENST00000476027 927 ntTSL 312.17□□□□□ -0.462e-6■■■□□ 15.4
LSM11P83369 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.462e-6■■■□□ 15.4
LSM11P83369 GTF2I-209ENST00000484840 574 ntTSL 412.08□□□□□ -0.482e-6■■■□□ 15.4
LSM11P83369 SCAF4-206ENST00000485790 1282 ntTSL 212.02□□□□□ -0.492e-6■■■□□ 15.4
LSM11P83369 SAT2-213ENST00000576686 582 ntTSL 211.88□□□□□ -0.512e-7■■■□□ 15.4
LSM11P83369 WDR82-202ENST00000463624 574 ntTSL 411.8□□□□□ -0.522e-6■■■□□ 15.4
LSM11P83369 TMEM106B-202ENST00000396668 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.532e-6■■■□□ 15.4
LSM11P83369 WARS-229ENST00000556435 528 ntTSL 211.62□□□□□ -0.552e-6■■■□□ 15.4
LSM11P83369 SAT2-206ENST00000571195 814 ntTSL 211.6□□□□□ -0.552e-7■■■□□ 15.4
LSM11P83369 SMAD5-209ENST00000514777 588 ntTSL 311.56□□□□□ -0.562e-6■■■□□ 15.4
LSM11P83369 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.564e-46■■■□□ 15.4
LSM11P83369 NABP1-209ENST00000462824 567 ntTSL 411.49□□□□□ -0.571e-11■■■□□ 15.4
LSM11P83369 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.572e-6■■■□□ 15.4
LSM11P83369 WARS-231ENST00000556579 565 ntTSL 211.45□□□□□ -0.582e-6■■■□□ 15.4
LSM11P83369 WARS-215ENST00000554509 563 ntTSL 411.45□□□□□ -0.582e-6■■■□□ 15.4
LSM11P83369 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.592e-6■■■□□ 15.4
LSM11P83369 WDR82-201ENST00000296490 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.62e-6■■■□□ 15.4
LSM11P83369 OSBP-202ENST00000525357 991 ntTSL 1 (best)11.18□□□□□ -0.622e-6■■■□□ 15.4
LSM11P83369 WARS-202ENST00000355338 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.622e-6■■■□□ 15.4
LSM11P83369 WARS-217ENST00000554605 560 ntTSL 311.17□□□□□ -0.622e-6■■■□□ 15.4
LSM11P83369 WARS-210ENST00000553769 560 ntTSL 411.17□□□□□ -0.622e-6■■■□□ 15.4
LSM11P83369 LMBR1L-218ENST00000551143 578 ntTSL 311.11□□□□□ -0.632e-6■■■□□ 15.4
LSM11P83369 RRBP1-203ENST00000377807 3792 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.634e-46■■■□□ 15.4
LSM11P83369 USP6NL-206ENST00000609853 1748 ntTSL 4 BASIC11.09□□□□□ -0.632e-6■■■□□ 15.4
LSM11P83369 ZNF267-205ENST00000566541 589 ntTSL 411.08□□□□□ -0.642e-6■■■□□ 15.4
LSM11P83369 RRBP1-210ENST00000610403 3309 ntTSL 5 BASIC11.02□□□□□ -0.644e-46■■■□□ 15.4
LSM11P83369 ACADM-206ENST00000525808 1422 ntTSL 210.99□□□□□ -0.652e-6■■■□□ 15.4
LSM11P83369 FAM133B-203ENST00000438306 2434 ntTSL 1 (best) BASIC10.81□□□□□ -0.682e-6■■■□□ 15.4
LSM11P83369 ACADM-208ENST00000526129 1536 ntTSL 210.8□□□□□ -0.682e-6■■■□□ 15.4
LSM11P83369 WARS-205ENST00000553395 801 ntTSL 510.8□□□□□ -0.682e-6■■■□□ 15.4
LSM11P83369 FAM133B-211ENST00000494079 854 ntTSL 310.77□□□□□ -0.692e-6■■■□□ 15.4
LSM11P83369 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC10.72□□□□□ -0.692e-6■■■□□ 15.4
LSM11P83369 SMAD5-210ENST00000515005 368 ntTSL 1 (best)10.66□□□□□ -0.72e-6■■■□□ 15.4
LSM11P83369 YY1AP1-209ENST00000368330 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.722e-6■■■□□ 15.4
LSM11P83369 HACE1-205ENST00000517424 1866 ntTSL 210.49□□□□□ -0.732e-6■■■□□ 15.4
LSM11P83369 HACE1-208ENST00000518402 1521 ntTSL 510.47□□□□□ -0.732e-6■■■□□ 15.4
LSM11P83369 SAT2-205ENST00000571074 860 ntTSL 210.45□□□□□ -0.742e-7■■■□□ 15.4
LSM11P83369 NABP1-206ENST00000435931 915 ntTSL 510.44□□□□□ -0.741e-11■■■□□ 15.4
LSM11P83369 OSBP-203ENST00000528903 873 ntTSL 210.26□□□□□ -0.772e-6■■■□□ 15.4
LSM11P83369 ACADM-205ENST00000481374 666 ntTSL 310.25□□□□□ -0.772e-6■■■□□ 15.4
LSM11P83369 NPEPPS-201ENST00000322157 4353 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.781e-11■■■□□ 15.4
LSM11P83369 USP6NL-202ENST00000379237 4546 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.792e-6■■■□□ 15.4
LSM11P83369 SCAF4-203ENST00000434667 3846 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.82e-6■■■□□ 15.4
LSM11P83369 SAT2-208ENST00000573566 640 ntTSL 2 BASIC10□□□□□ -0.812e-7■■■□□ 15.4
LSM11P83369 YY1AP1-204ENST00000354691 2498 ntTSL 29.93□□□□□ -0.822e-6■■■□□ 15.4
LSM11P83369 SMAD5-201ENST00000506223 548 ntTSL 49.89□□□□□ -0.832e-6■■■□□ 15.4
LSM11P83369 WARS-234ENST00000556695 553 ntTSL 49.73□□□□□ -0.852e-6■■■□□ 15.4
LSM11P83369 WARS-208ENST00000553545 591 ntTSL 49.66□□□□□ -0.862e-6■■■□□ 15.4
LSM11P83369 HACE1-209ENST00000518503 1608 ntTSL 59.66□□□□□ -0.862e-6■■■□□ 15.4
LSM11P83369 WARS-221ENST00000555031 658 ntTSL 29.61□□□□□ -0.872e-6■■■□□ 15.4
LSM11P83369 SAT2-211ENST00000575826 838 ntTSL 39.58□□□□□ -0.882e-7■■■□□ 15.4
LSM11P83369 SAT2-212ENST00000576579 535 ntTSL 39.45□□□□□ -0.92e-7■■■□□ 15.4
LSM11P83369 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.912e-6■■■□□ 15.4
LSM11P83369 NPEPPS-217ENST00000531486 2290 ntTSL 29.38□□□□□ -0.911e-11■■■□□ 15.4
LSM11P83369 WARS-201ENST00000344102 2690 ntTSL 5 BASIC9.27□□□□□ -0.932e-6■■■□□ 15.4
LSM11P83369 WARS-238ENST00000557135 2080 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.932e-6■■■□□ 15.4
LSM11P83369 ZNF267-201ENST00000300870 3317 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.932e-6■■■□□ 15.4
LSM11P83369 ACADM-212ENST00000529059 1357 ntTSL 29.2□□□□□ -0.942e-6■■■□□ 15.4
LSM11P83369 ZNF267-202ENST00000394846 680 ntTSL 2 BASIC9.17□□□□□ -0.942e-6■■■□□ 15.4
LSM11P83369 ACADM-214ENST00000532207 762 ntTSL 29.16□□□□□ -0.942e-6■■■□□ 15.4
LSM11P83369 HELLS-208ENST00000462057 778 ntTSL 39.12□□□□□ -0.952e-6■■■□□ 15.4
LSM11P83369 WARS-233ENST00000556660 584 ntTSL 49.11□□□□□ -0.952e-6■■■□□ 15.4
LSM11P83369 WARS-235ENST00000556698 640 ntTSL 49.11□□□□□ -0.952e-6■■■□□ 15.4
LSM11P83369 WARS-241ENST00000557347 577 ntTSL 49.11□□□□□ -0.952e-6■■■□□ 15.4
LSM11P83369 WARS-228ENST00000556338 547 ntTSL 49.11□□□□□ -0.952e-6■■■□□ 15.4
LSM11P83369 WARS-230ENST00000556504 847 ntTSL 59.11□□□□□ -0.952e-6■■■□□ 15.4
LSM11P83369 WARS-211ENST00000553808 1060 ntTSL 29□□□□□ -0.972e-6■■■□□ 15.4
LSM11P83369 FAM133B-201ENST00000415397 1890 ntTSL 58.95□□□□□ -0.982e-6■■■□□ 15.4
LSM11P83369 SAT2-201ENST00000269298 946 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.012e-7■■■□□ 15.4
LSM11P83369 HELLS-210ENST00000466552 2724 ntTSL 28.64□□□□□ -1.032e-6■■■□□ 15.4
LSM11P83369 NCOA1-204ENST00000405141 7405 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.046e-9■■■□□ 15.4
LSM11P83369 SLC9A6-209ENST00000636347 4867 ntTSL 5 BASIC8.53□□□□□ -1.042e-6■■■□□ 15.4
LSM11P83369 DAP-206ENST00000514882 562 ntTSL 48.5□□□□□ -1.056e-9■■■□□ 15.4
LSM11P83369 ZNF767P-203ENST00000481762 357 ntTSL 38.44□□□□□ -1.062e-6■■■□□ 15.4
LSM11P83369 FAM133B-202ENST00000427372 931 ntTSL 1 (best) BASIC8.42□□□□□ -1.062e-6■■■□□ 15.4
LSM11P83369 GAB2-205ENST00000528886 543 ntTSL 48.33□□□□□ -1.082e-6■■■□□ 15.4
LSM11P83369 NABP1-202ENST00000307849 3002 ntTSL 28.28□□□□□ -1.081e-11■■■□□ 15.4
LSM11P83369 YY1AP1-215ENST00000436865 2684 ntTSL 1 (best)8.26□□□□□ -1.092e-6■■■□□ 15.4
LSM11P83369 SLMAP-203ENST00000383718 6749 ntTSL 2 BASIC8.25□□□□□ -1.096e-9■■■□□ 15.4
LSM11P83369 WARS-204ENST00000392882 2938 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.12e-6■■■□□ 15.4
LSM11P83369 NPEPPS-216ENST00000530514 2092 ntTSL 28.06□□□□□ -1.121e-11■■■□□ 15.4
LSM11P83369 ACADM-217ENST00000534334 1149 ntTSL 1 (best)8.01□□□□□ -1.132e-6■■■□□ 15.4
LSM11P83369 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC7.96□□□□□ -1.142e-6■■■□□ 15.4
Retrieved 100 of 11,495 protein–RNA pairs in 76.4 ms