Protein–RNA interactions for Protein: P39904

VPS52, Vacuolar protein sorting-associated protein 52, yeastyeast

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS52P39904 TMA64YDR117C 1698 nt2.79□□□□□ -1.96
VPS52P39904 TSC11YER093C 4293 nt2.78□□□□□ -1.96
VPS52P39904 YCG1YDR325W 3108 nt2.78□□□□□ -1.96
VPS52P39904 EPL1YFL024C 2499 nt2.78□□□□□ -1.96
VPS52P39904 RRI2YOL117W 1938 nt2.78□□□□□ -1.96
VPS52P39904 HNT1YDL125C 477 nt2.78□□□□□ -1.96
VPS52P39904 YDR442WYDR442W 393 nt2.78□□□□□ -1.96
VPS52P39904 RPL9AYGL147C 576 nt2.78□□□□□ -1.96
VPS52P39904 YGR042WYGR042W 816 nt2.78□□□□□ -1.96
VPS52P39904 YGR053CYGR053C 852 nt2.78□□□□□ -1.96
VPS52P39904 AFB1YLR040C 675 nt2.78□□□□□ -1.96
VPS52P39904 HHF2YNL030W 312 nt2.78□□□□□ -1.96
VPS52P39904 YNL324WYNL324W 396 nt2.78□□□□□ -1.96
VPS52P39904 BUD21YOR078W 645 nt2.78□□□□□ -1.96
VPS52P39904 PFY1YOR122C 381 nt2.78□□□□□ -1.96
VPS52P39904 YOR331CYOR331C 558 nt2.78□□□□□ -1.96
VPS52P39904 PIS1YPR113W 663 nt2.78□□□□□ -1.96
VPS52P39904 AIM4YBR194W 372 nt2.78□□□□□ -1.96
VPS52P39904 URB2YJR041C 3525 nt2.77□□□□□ -1.97
VPS52P39904 DBP10YDL031W 2988 nt2.77□□□□□ -1.97
VPS52P39904 YGR018CYGR018C 330 nt2.77□□□□□ -1.97
VPS52P39904 YHR130CYHR130C 336 nt2.77□□□□□ -1.97
VPS52P39904 SDP1YIL113W 630 nt2.77□□□□□ -1.97
VPS52P39904 RPL8BYLL045C 771 nt2.77□□□□□ -1.97
VPS52P39904 RPS12YOR369C 432 nt2.77□□□□□ -1.97
VPS52P39904 YPR096CYPR096C 303 nt2.77□□□□□ -1.97
VPS52P39904 YPR145C-AYPR145C-A 237 nt2.77□□□□□ -1.97
VPS52P39904 DAL5YJR152W 1632 nt2.77□□□□□ -1.97
VPS52P39904 KHA1YJL094C 2622 nt2.77□□□□□ -1.97
VPS52P39904 FAA2YER015W 2235 nt2.77□□□□□ -1.97
VPS52P39904 MNT3YIL014W 1893 nt2.77□□□□□ -1.97
VPS52P39904 MSH2YOL090W 2895 nt2.77□□□□□ -1.97
VPS52P39904 YEL1YBL060W 2064 nt2.77□□□□□ -1.97
VPS52P39904 MAL33YBR297W 1407 nt2.76□□□□□ -1.97
VPS52P39904 SMC2YFR031C 3513 nt2.76□□□□□ -1.97
VPS52P39904 YME2YMR302C 2553 nt2.76□□□□□ -1.97
VPS52P39904 ASM4YDL088C 1587 nt2.76□□□□□ -1.97
VPS52P39904 MRH1YDR033W 963 nt2.76□□□□□ -1.97
VPS52P39904 IRC2YDR112W 309 nt2.76□□□□□ -1.97
VPS52P39904 RMT2YDR465C 1239 nt2.76□□□□□ -1.97
VPS52P39904 RPB9YGL070C 369 nt2.76□□□□□ -1.97
VPS52P39904 SPO13YHR014W 876 nt2.76□□□□□ -1.97
VPS52P39904 MDV1YJL112W 2145 nt2.76□□□□□ -1.97
VPS52P39904 YKL222CYKL222C 2118 nt2.76□□□□□ -1.97
VPS52P39904 SRL3YKR091W 741 nt2.76□□□□□ -1.97
VPS52P39904 SYM1YLR251W 594 nt2.76□□□□□ -1.97
VPS52P39904 SVS1YPL163C 783 nt2.76□□□□□ -1.97
VPS52P39904 DRS2YAL026C 4068 nt2.76□□□□□ -1.97
VPS52P39904 JJJ2YJL162C 1752 nt2.76□□□□□ -1.97
VPS52P39904 NMD2YHR077C 3270 nt2.76□□□□□ -1.97
VPS52P39904 YMR173W-AYMR173W-A 1185 nt2.75□□□□□ -1.97
VPS52P39904 RRT16YNL105W 429 nt2.75□□□□□ -1.97
VPS52P39904 RPL20BYOR312C 519 nt2.75□□□□□ -1.97
VPS52P39904 SSF1YHR066W 1362 nt2.74□□□□□ -1.97
VPS52P39904 UBP16YPL072W 1500 nt2.74□□□□□ -1.97
VPS52P39904 YDR098C-BYDR098C-B 5268 nt2.74□□□□□ -1.97
VPS52P39904 YDR210C-DYDR210C-D 5268 nt2.74□□□□□ -1.97
VPS52P39904 YDR316W-BYDR316W-B 5268 nt2.74□□□□□ -1.97
VPS52P39904 YDR365W-BYDR365W-B 5268 nt2.74□□□□□ -1.97
VPS52P39904 YER138CYER138C 5268 nt2.74□□□□□ -1.97
VPS52P39904 YER160CYER160C 5268 nt2.74□□□□□ -1.97
VPS52P39904 YGR038C-BYGR038C-B 5268 nt2.74□□□□□ -1.97
VPS52P39904 YGR161C-DYGR161C-D 5268 nt2.74□□□□□ -1.97
VPS52P39904 YJR027WYJR027W 5268 nt2.74□□□□□ -1.97
VPS52P39904 YLR157C-BYLR157C-B 5268 nt2.74□□□□□ -1.97
VPS52P39904 YML039WYML039W 5268 nt2.74□□□□□ -1.97
VPS52P39904 YML045WYML045W 5268 nt2.74□□□□□ -1.97
VPS52P39904 YMR050CYMR050C 5268 nt2.74□□□□□ -1.97
VPS52P39904 YOL103W-BYOL103W-B 5268 nt2.74□□□□□ -1.97
VPS52P39904 YBR012W-BYBR012W-B 5271 nt2.74□□□□□ -1.97
VPS52P39904 YOR142W-BYOR142W-B 5268 nt2.74□□□□□ -1.97
VPS52P39904 YPL257W-BYPL257W-B 5268 nt2.74□□□□□ -1.97
VPS52P39904 YPR158W-BYPR158W-B 5271 nt2.74□□□□□ -1.97
VPS52P39904 ROG1YGL144C 2058 nt2.74□□□□□ -1.97
VPS52P39904 DBF20YPR111W 1695 nt2.74□□□□□ -1.97
VPS52P39904 NSA2YER126C 786 nt2.74□□□□□ -1.97
VPS52P39904 YIR036W-AYIR036W-A 402 nt2.74□□□□□ -1.97
VPS52P39904 RPL6AYML073C 531 nt2.74□□□□□ -1.97
VPS52P39904 YOR169CYOR169C 465 nt2.74□□□□□ -1.97
VPS52P39904 BNI4YNL233W 2679 nt2.74□□□□□ -1.97
VPS52P39904 SSP1YHR184W 1716 nt2.73□□□□□ -1.97
VPS52P39904 MYO5YMR109W 3660 nt2.73□□□□□ -1.97
VPS52P39904 snR56snR56 88 nt2.73□□□□□ -1.97
VPS52P39904 YDL009CYDL009C 324 nt2.73□□□□□ -1.97
VPS52P39904 YER091C-AYER091C-A 222 nt2.73□□□□□ -1.97
VPS52P39904 RPL23BYER117W 414 nt2.73□□□□□ -1.97
VPS52P39904 COX13YGL191W 390 nt2.73□□□□□ -1.97
VPS52P39904 Q0142Q0142 177 nt2.73□□□□□ -1.97
VPS52P39904 YHL005CYHL005C 393 nt2.73□□□□□ -1.97
VPS52P39904 LSM8YJR022W 330 nt2.73□□□□□ -1.97
VPS52P39904 COX14YML129C 213 nt2.73□□□□□ -1.97
VPS52P39904 YMR304C-AYMR304C-A 351 nt2.73□□□□□ -1.97
VPS52P39904 PBI2YNL015W 228 nt2.73□□□□□ -1.97
VPS52P39904 GPI15YNL038W 690 nt2.73□□□□□ -1.97
VPS52P39904 PBS2YJL128C 2007 nt2.73□□□□□ -1.97
VPS52P39904 CCT7YJL111W 1653 nt2.73□□□□□ -1.97
VPS52P39904 FUN30YAL019W 3396 nt2.72□□□□□ -1.97
VPS52P39904 TLC1TLC1 1301 nt2.72□□□□□ -1.97
VPS52P39904 ICR1ICR1 3199 nt2.72□□□□□ -1.97
VPS52P39904 TOM1YDR457W 9807 nt2.72□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 92.6 ms