Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 PET123YOR158W 957 nt3.27□□□□□ -1.89
MSH1P25846 EXO84YBR102C 2262 nt3.27□□□□□ -1.89
MSH1P25846 YHR080CYHR080C 4038 nt3.27□□□□□ -1.89
MSH1P25846 BIT61YJL058C 1632 nt3.26□□□□□ -1.89
MSH1P25846 BNA4YBL098W 1383 nt3.26□□□□□ -1.89
MSH1P25846 GIS4YML006C 2325 nt3.26□□□□□ -1.89
MSH1P25846 YNR063WYNR063W 1824 nt3.26□□□□□ -1.89
MSH1P25846 STE6YKL209C 3873 nt3.26□□□□□ -1.89
MSH1P25846 YGR290WYGR290W 444 nt3.26□□□□□ -1.89
MSH1P25846 YLR252WYLR252W 306 nt3.26□□□□□ -1.89
MSH1P25846 ILV5YLR355C 1188 nt3.26□□□□□ -1.89
MSH1P25846 BER1YLR412W 825 nt3.26□□□□□ -1.89
MSH1P25846 VID24YBR105C 1089 nt3.26□□□□□ -1.89
MSH1P25846 VAS1YGR094W 3315 nt3.26□□□□□ -1.89
MSH1P25846 MAK21YDR060W 3078 nt3.25□□□□□ -1.89
MSH1P25846 BUD4YJR092W 4344 nt3.25□□□□□ -1.89
MSH1P25846 ESL1YIL151C 3357 nt3.25□□□□□ -1.89
MSH1P25846 YKL222CYKL222C 2118 nt3.25□□□□□ -1.89
MSH1P25846 MIX14YDR031W 366 nt3.25□□□□□ -1.89
MSH1P25846 MET32YDR253C 576 nt3.25□□□□□ -1.89
MSH1P25846 PNC1YGL037C 651 nt3.25□□□□□ -1.89
MSH1P25846 YHR028W-AYHR028W-A 321 nt3.25□□□□□ -1.89
MSH1P25846 YIR020CYIR020C 303 nt3.25□□□□□ -1.89
MSH1P25846 RPS21BYJL136C 264 nt3.25□□□□□ -1.89
MSH1P25846 EAF6YJR082C 342 nt3.25□□□□□ -1.89
MSH1P25846 RPL19BYBL027W 570 nt3.25□□□□□ -1.89
MSH1P25846 UBX4YMR067C 1251 nt3.25□□□□□ -1.89
MSH1P25846 TOA1YOR194C 861 nt3.25□□□□□ -1.89
MSH1P25846 YKL100CYKL100C 1764 nt3.25□□□□□ -1.89
MSH1P25846 INP52YNL106C 3552 nt3.25□□□□□ -1.89
MSH1P25846 VHR2YER064C 1518 nt3.24□□□□□ -1.89
MSH1P25846 PFF1YBR074W 2931 nt3.24□□□□□ -1.89
MSH1P25846 YCR001WYCR001W 315 nt3.24□□□□□ -1.89
MSH1P25846 ERG28YER044C 447 nt3.24□□□□□ -1.89
MSH1P25846 RSR1YGR152C 819 nt3.24□□□□□ -1.89
MSH1P25846 TIM10YHR005C-A 282 nt3.24□□□□□ -1.89
MSH1P25846 SDH3YKL141W 597 nt3.24□□□□□ -1.89
MSH1P25846 NFT1YKR103W 3657 nt3.24□□□□□ -1.89
MSH1P25846 EPL1YFL024C 2499 nt3.24□□□□□ -1.89
MSH1P25846 CEP3YMR168C 1827 nt3.23□□□□□ -1.89
MSH1P25846 YOR343W-AYOR343W-A 1317 nt3.23□□□□□ -1.89
MSH1P25846 HMLALPHA2YCL067C 633 nt3.23□□□□□ -1.89
MSH1P25846 MATALPHA2YCR039C 633 nt3.23□□□□□ -1.89
MSH1P25846 RRT13YER066W 558 nt3.23□□□□□ -1.89
MSH1P25846 RPS26BYER131W 360 nt3.23□□□□□ -1.89
MSH1P25846 YER165C-AYER165C-A 357 nt3.23□□□□□ -1.89
MSH1P25846 YNL122CYNL122C 348 nt3.23□□□□□ -1.89
MSH1P25846 snR191snR191 274 nt3.23□□□□□ -1.89
MSH1P25846 ALY1YKR021W 2748 nt3.23□□□□□ -1.89
MSH1P25846 PHR1YOR386W 1698 nt3.23□□□□□ -1.89
MSH1P25846 YDR210W-BYDR210W-B 5313 nt3.22□□□□□ -1.89
MSH1P25846 YDR261W-BYDR261W-B 5313 nt3.22□□□□□ -1.89
MSH1P25846 YFL002W-AYFL002W-A 5313 nt3.22□□□□□ -1.89
MSH1P25846 YGR161W-BYGR161W-B 5313 nt3.22□□□□□ -1.89
MSH1P25846 YLR410W-BYLR410W-B 5313 nt3.22□□□□□ -1.89
MSH1P25846 YCL019WYCL019W 5313 nt3.22□□□□□ -1.89
MSH1P25846 YAT2YER024W 2772 nt3.22□□□□□ -1.89
MSH1P25846 YDL009CYDL009C 324 nt3.22□□□□□ -1.89
MSH1P25846 YDR199WYDR199W 366 nt3.22□□□□□ -1.89
MSH1P25846 CIC1YHR052W 1131 nt3.22□□□□□ -1.89
MSH1P25846 DAD2YKR083C 402 nt3.22□□□□□ -1.89
MSH1P25846 DAL5YJR152W 1632 nt3.22□□□□□ -1.89
MSH1P25846 YEL1YBL060W 2064 nt3.21□□□□□ -1.89
MSH1P25846 PSK1YAL017W 4071 nt3.21□□□□□ -1.9
MSH1P25846 RRI2YOL117W 1938 nt3.21□□□□□ -1.9
MSH1P25846 DUF1YOL087C 3351 nt3.21□□□□□ -1.9
MSH1P25846 MXR1YER042W 555 nt3.21□□□□□ -1.9
MSH1P25846 YGR018CYGR018C 330 nt3.21□□□□□ -1.9
MSH1P25846 AFB1YLR040C 675 nt3.21□□□□□ -1.9
MSH1P25846 PHO80YOL001W 882 nt3.21□□□□□ -1.9
MSH1P25846 YOR331CYOR331C 558 nt3.21□□□□□ -1.9
MSH1P25846 CDC20YGL116W 1833 nt3.21□□□□□ -1.9
MSH1P25846 RIX1YHR197W 2292 nt3.21□□□□□ -1.9
MSH1P25846 NMA111YNL123W 2994 nt3.21□□□□□ -1.9
MSH1P25846 SEN54YPL083C 1404 nt3.2□□□□□ -1.9
MSH1P25846 APC11YDL008W 498 nt3.2□□□□□ -1.9
MSH1P25846 VPS51YKR020W 495 nt3.2□□□□□ -1.9
MSH1P25846 YMR304C-AYMR304C-A 351 nt3.2□□□□□ -1.9
MSH1P25846 SPC29YPL124W 762 nt3.2□□□□□ -1.9
MSH1P25846 YIL082W-AYIL082W-A 4497 nt3.2□□□□□ -1.9
MSH1P25846 CDC55YGL190C 1581 nt3.2□□□□□ -1.9
MSH1P25846 BOI1YBL085W 2943 nt3.19□□□□□ -1.9
MSH1P25846 YEL030C-AYEL030C-A 315 nt3.19□□□□□ -1.9
MSH1P25846 PRM8YGL053W 714 nt3.19□□□□□ -1.9
MSH1P25846 YMR013C-AYMR013C-A 150 nt3.19□□□□□ -1.9
MSH1P25846 YMR144WYMR144W 1029 nt3.19□□□□□ -1.9
MSH1P25846 YNL179CYNL179C 438 nt3.19□□□□□ -1.9
MSH1P25846 HEM4YOR278W 828 nt3.19□□□□□ -1.9
MSH1P25846 YCK2YNL154C 1641 nt3.19□□□□□ -1.9
MSH1P25846 DSE4YNR067C 3354 nt3.18□□□□□ -1.9
MSH1P25846 YGL042CYGL042C 306 nt3.18□□□□□ -1.9
MSH1P25846 YGR045CYGR045C 363 nt3.18□□□□□ -1.9
MSH1P25846 ALG14YBR070C 714 nt3.18□□□□□ -1.9
MSH1P25846 YPR096CYPR096C 303 nt3.18□□□□□ -1.9
MSH1P25846 PDC2YDR081C 2778 nt3.18□□□□□ -1.9
MSH1P25846 MES1YGR264C 2256 nt3.18□□□□□ -1.9
MSH1P25846 POM152YMR129W 4014 nt3.18□□□□□ -1.9
MSH1P25846 ECM21YBL101C 3354 nt3.18□□□□□ -1.9
MSH1P25846 SPO14YKR031C 5052 nt3.17□□□□□ -1.9
MSH1P25846 SSF1YHR066W 1362 nt3.17□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 18.7 ms