Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Igkv3-5A0A140T8M6 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Igkv3-5A0A140T8M6 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Igkv3-5A0A140T8M6 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Igkv3-5A0A140T8M6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Igkv3-5A0A140T8M6 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Igkv3-5A0A140T8M6 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Igkv3-5A0A140T8M6 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Igkv3-5A0A140T8M6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Igkv3-5A0A140T8M6 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Igkv3-5A0A140T8M6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Igkv3-5A0A140T8M6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Igkv3-5A0A140T8M6 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv3-5A0A140T8M6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv3-5A0A140T8M6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv3-5A0A140T8M6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC11.4□□□□□ -0.58
Igkv3-5A0A140T8M6 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv3-5A0A140T8M6 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv3-5A0A140T8M6 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC11.4□□□□□ -0.58
Igkv3-5A0A140T8M6 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv3-5A0A140T8M6 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv3-5A0A140T8M6 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC11.4□□□□□ -0.58
Igkv3-5A0A140T8M6 Gm43017-201ENSMUST00000198296 752 ntBASIC11.4□□□□□ -0.58
Igkv3-5A0A140T8M6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC11.4□□□□□ -0.58
Igkv3-5A0A140T8M6 Gm45417-201ENSMUST00000209533 758 ntBASIC11.4□□□□□ -0.58
Igkv3-5A0A140T8M6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv3-5A0A140T8M6 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv3-5A0A140T8M6 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Igkv3-5A0A140T8M6 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Igkv3-5A0A140T8M6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv3-5A0A140T8M6 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv3-5A0A140T8M6 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Igkv3-5A0A140T8M6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv3-5A0A140T8M6 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv3-5A0A140T8M6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv3-5A0A140T8M6 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv3-5A0A140T8M6 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv3-5A0A140T8M6 Gm9885-202ENSMUST00000186234 2209 ntBASIC11.39□□□□□ -0.59
Igkv3-5A0A140T8M6 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Igkv3-5A0A140T8M6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC11.39□□□□□ -0.59
Igkv3-5A0A140T8M6 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC11.39□□□□□ -0.59
Igkv3-5A0A140T8M6 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv3-5A0A140T8M6 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv3-5A0A140T8M6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv3-5A0A140T8M6 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv3-5A0A140T8M6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv3-5A0A140T8M6 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Igkv3-5A0A140T8M6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv3-5A0A140T8M6 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv3-5A0A140T8M6 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv3-5A0A140T8M6 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv3-5A0A140T8M6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv3-5A0A140T8M6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv3-5A0A140T8M6 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-5A0A140T8M6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-5A0A140T8M6 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-5A0A140T8M6 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-5A0A140T8M6 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-5A0A140T8M6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-5A0A140T8M6 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-5A0A140T8M6 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-5A0A140T8M6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-5A0A140T8M6 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-5A0A140T8M6 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-5A0A140T8M6 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Igkv3-5A0A140T8M6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-5A0A140T8M6 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-5A0A140T8M6 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Igkv3-5A0A140T8M6 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-5A0A140T8M6 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-5A0A140T8M6 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-5A0A140T8M6 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC11.38□□□□□ -0.59
Igkv3-5A0A140T8M6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-5A0A140T8M6 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-5A0A140T8M6 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-5A0A140T8M6 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-5A0A140T8M6 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-5A0A140T8M6 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv3-5A0A140T8M6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv3-5A0A140T8M6 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv3-5A0A140T8M6 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv3-5A0A140T8M6 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv3-5A0A140T8M6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv3-5A0A140T8M6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv3-5A0A140T8M6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Igkv3-5A0A140T8M6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC11.37□□□□□ -0.59
Igkv3-5A0A140T8M6 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Igkv3-5A0A140T8M6 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC11.37□□□□□ -0.59
Igkv3-5A0A140T8M6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv3-5A0A140T8M6 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv3-5A0A140T8M6 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv3-5A0A140T8M6 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Igkv3-5A0A140T8M6 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv3-5A0A140T8M6 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Igkv3-5A0A140T8M6 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv3-5A0A140T8M6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC11.37□□□□□ -0.59
Igkv3-5A0A140T8M6 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC11.37□□□□□ -0.59
Igkv3-5A0A140T8M6 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv3-5A0A140T8M6 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv3-5A0A140T8M6 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms