Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPH3AQ9Y2J0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPH3AQ9Y2J0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.97■□□□□ 0.63
RPH3AQ9Y2J0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPH3AQ9Y2J0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.97■□□□□ 0.63
RPH3AQ9Y2J0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.97■□□□□ 0.63
RPH3AQ9Y2J0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.97■□□□□ 0.63
RPH3AQ9Y2J0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.97■□□□□ 0.63
RPH3AQ9Y2J0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.97■□□□□ 0.63
RPH3AQ9Y2J0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPH3AQ9Y2J0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPH3AQ9Y2J0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.97■□□□□ 0.63
RPH3AQ9Y2J0 Z98882.1-201ENST00000622160 2253 ntBASIC18.97■□□□□ 0.63
RPH3AQ9Y2J0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPH3AQ9Y2J0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPH3AQ9Y2J0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RPH3AQ9Y2J0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.96■□□□□ 0.63
RPH3AQ9Y2J0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPH3AQ9Y2J0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.96■□□□□ 0.63
RPH3AQ9Y2J0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.96■□□□□ 0.63
RPH3AQ9Y2J0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.96■□□□□ 0.63
RPH3AQ9Y2J0 DUX4L16-201ENST00000555130 1264 ntBASIC18.96■□□□□ 0.63
RPH3AQ9Y2J0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
RPH3AQ9Y2J0 RAP2CP1-201ENST00000605103 478 ntBASIC18.96■□□□□ 0.63
RPH3AQ9Y2J0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.96■□□□□ 0.63
RPH3AQ9Y2J0 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.96■□□□□ 0.63
RPH3AQ9Y2J0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPH3AQ9Y2J0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPH3AQ9Y2J0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RPH3AQ9Y2J0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPH3AQ9Y2J0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPH3AQ9Y2J0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPH3AQ9Y2J0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPH3AQ9Y2J0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPH3AQ9Y2J0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.95■□□□□ 0.62
RPH3AQ9Y2J0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPH3AQ9Y2J0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.95■□□□□ 0.62
RPH3AQ9Y2J0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.95■□□□□ 0.62
RPH3AQ9Y2J0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.95■□□□□ 0.62
RPH3AQ9Y2J0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
RPH3AQ9Y2J0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.95■□□□□ 0.62
RPH3AQ9Y2J0 SLC7A5P1-201ENST00000568957 537 ntBASIC18.95■□□□□ 0.62
RPH3AQ9Y2J0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPH3AQ9Y2J0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.95■□□□□ 0.62
RPH3AQ9Y2J0 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.95■□□□□ 0.62
RPH3AQ9Y2J0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPH3AQ9Y2J0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
RPH3AQ9Y2J0 AC066615.1-201ENST00000640911 628 ntBASIC18.95■□□□□ 0.62
RPH3AQ9Y2J0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPH3AQ9Y2J0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPH3AQ9Y2J0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPH3AQ9Y2J0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPH3AQ9Y2J0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPH3AQ9Y2J0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
RPH3AQ9Y2J0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPH3AQ9Y2J0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
RPH3AQ9Y2J0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPH3AQ9Y2J0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.94■□□□□ 0.62
RPH3AQ9Y2J0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.94■□□□□ 0.62
RPH3AQ9Y2J0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.94■□□□□ 0.62
RPH3AQ9Y2J0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPH3AQ9Y2J0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPH3AQ9Y2J0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.94■□□□□ 0.62
RPH3AQ9Y2J0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.94■□□□□ 0.62
RPH3AQ9Y2J0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RPH3AQ9Y2J0 AC026185.1-201ENST00000445748 174 ntBASIC18.94■□□□□ 0.62
RPH3AQ9Y2J0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.94■□□□□ 0.62
RPH3AQ9Y2J0 TERF1P5-201ENST00000477545 1207 ntBASIC18.94■□□□□ 0.62
RPH3AQ9Y2J0 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
RPH3AQ9Y2J0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.94■□□□□ 0.62
RPH3AQ9Y2J0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.94■□□□□ 0.62
RPH3AQ9Y2J0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.94■□□□□ 0.62
RPH3AQ9Y2J0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPH3AQ9Y2J0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.94■□□□□ 0.62
RPH3AQ9Y2J0 SLC25A24-204ENST00000569674 2357 ntBASIC18.93■□□□□ 0.62
RPH3AQ9Y2J0 AC026310.3-201ENST00000625186 2373 ntBASIC18.93■□□□□ 0.62
RPH3AQ9Y2J0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPH3AQ9Y2J0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPH3AQ9Y2J0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPH3AQ9Y2J0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RPH3AQ9Y2J0 AC007375.3-201ENST00000600936 2314 ntBASIC18.93■□□□□ 0.62
RPH3AQ9Y2J0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPH3AQ9Y2J0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RPH3AQ9Y2J0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPH3AQ9Y2J0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RPH3AQ9Y2J0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.93■□□□□ 0.62
RPH3AQ9Y2J0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPH3AQ9Y2J0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.93■□□□□ 0.62
RPH3AQ9Y2J0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.93■□□□□ 0.62
RPH3AQ9Y2J0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.93■□□□□ 0.62
RPH3AQ9Y2J0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.93■□□□□ 0.62
RPH3AQ9Y2J0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.93■□□□□ 0.62
RPH3AQ9Y2J0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.93■□□□□ 0.62
RPH3AQ9Y2J0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPH3AQ9Y2J0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPH3AQ9Y2J0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.92■□□□□ 0.62
RPH3AQ9Y2J0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPH3AQ9Y2J0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPH3AQ9Y2J0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.92■□□□□ 0.62
RPH3AQ9Y2J0 AC007322.1-201ENST00000426983 750 ntBASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms