Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NEUROD4Q9HD90 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NEUROD4Q9HD90 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NEUROD4Q9HD90 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.53■□□□□ 0.72
NEUROD4Q9HD90 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NEUROD4Q9HD90 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NEUROD4Q9HD90 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NEUROD4Q9HD90 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
NEUROD4Q9HD90 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NEUROD4Q9HD90 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
NEUROD4Q9HD90 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.52■□□□□ 0.72
NEUROD4Q9HD90 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.52■□□□□ 0.72
NEUROD4Q9HD90 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NEUROD4Q9HD90 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NEUROD4Q9HD90 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.52■□□□□ 0.72
NEUROD4Q9HD90 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.52■□□□□ 0.72
NEUROD4Q9HD90 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.52■□□□□ 0.72
NEUROD4Q9HD90 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.52■□□□□ 0.72
NEUROD4Q9HD90 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.52■□□□□ 0.72
NEUROD4Q9HD90 AC120498.10-201ENST00000621827 505 ntBASIC19.52■□□□□ 0.72
NEUROD4Q9HD90 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NEUROD4Q9HD90 AL157384.1-201ENST00000445995 2473 ntBASIC19.52■□□□□ 0.72
NEUROD4Q9HD90 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
NEUROD4Q9HD90 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
NEUROD4Q9HD90 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NEUROD4Q9HD90 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.52■□□□□ 0.71
NEUROD4Q9HD90 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
NEUROD4Q9HD90 FEM1AP1-201ENST00000431297 1995 ntBASIC19.52■□□□□ 0.71
NEUROD4Q9HD90 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NEUROD4Q9HD90 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NEUROD4Q9HD90 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.51■□□□□ 0.71
NEUROD4Q9HD90 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NEUROD4Q9HD90 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NEUROD4Q9HD90 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.51■□□□□ 0.71
NEUROD4Q9HD90 YBX1P1-201ENST00000445822 960 ntBASIC19.51■□□□□ 0.71
NEUROD4Q9HD90 AC010141.2-201ENST00000452426 721 ntBASIC19.51■□□□□ 0.71
NEUROD4Q9HD90 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.51■□□□□ 0.71
NEUROD4Q9HD90 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NEUROD4Q9HD90 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NEUROD4Q9HD90 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NEUROD4Q9HD90 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
NEUROD4Q9HD90 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
NEUROD4Q9HD90 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
NEUROD4Q9HD90 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NEUROD4Q9HD90 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
NEUROD4Q9HD90 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NEUROD4Q9HD90 AC011484.1-201ENST00000377652 1995 ntBASIC19.5■□□□□ 0.71
NEUROD4Q9HD90 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
NEUROD4Q9HD90 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.5■□□□□ 0.71
NEUROD4Q9HD90 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NEUROD4Q9HD90 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NEUROD4Q9HD90 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
NEUROD4Q9HD90 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.5■□□□□ 0.71
NEUROD4Q9HD90 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NEUROD4Q9HD90 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NEUROD4Q9HD90 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NEUROD4Q9HD90 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.5■□□□□ 0.71
NEUROD4Q9HD90 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
NEUROD4Q9HD90 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.5■□□□□ 0.71
NEUROD4Q9HD90 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.5■□□□□ 0.71
NEUROD4Q9HD90 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.5■□□□□ 0.71
NEUROD4Q9HD90 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NEUROD4Q9HD90 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NEUROD4Q9HD90 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEUROD4Q9HD90 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEUROD4Q9HD90 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEUROD4Q9HD90 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
NEUROD4Q9HD90 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.49■□□□□ 0.71
NEUROD4Q9HD90 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEUROD4Q9HD90 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.49■□□□□ 0.71
NEUROD4Q9HD90 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.49■□□□□ 0.71
NEUROD4Q9HD90 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
NEUROD4Q9HD90 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEUROD4Q9HD90 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEUROD4Q9HD90 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.49■□□□□ 0.71
NEUROD4Q9HD90 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.49■□□□□ 0.71
NEUROD4Q9HD90 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
NEUROD4Q9HD90 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEUROD4Q9HD90 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.48■□□□□ 0.71
NEUROD4Q9HD90 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEUROD4Q9HD90 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEUROD4Q9HD90 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEUROD4Q9HD90 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NEUROD4Q9HD90 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
NEUROD4Q9HD90 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEUROD4Q9HD90 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.48■□□□□ 0.71
NEUROD4Q9HD90 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NEUROD4Q9HD90 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NEUROD4Q9HD90 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.48■□□□□ 0.71
NEUROD4Q9HD90 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.48■□□□□ 0.71
NEUROD4Q9HD90 AC245052.3-201ENST00000450182 901 ntBASIC19.48■□□□□ 0.71
NEUROD4Q9HD90 DUX4L2-201ENST00000561772 1275 ntBASIC19.48■□□□□ 0.71
NEUROD4Q9HD90 TERF1P2-201ENST00000583350 1212 ntBASIC19.48■□□□□ 0.71
NEUROD4Q9HD90 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.48■□□□□ 0.71
NEUROD4Q9HD90 DUX4L6-201ENST00000626483 1275 ntBASIC19.48■□□□□ 0.71
NEUROD4Q9HD90 DUX4L1-201ENST00000627662 1275 ntBASIC19.48■□□□□ 0.71
NEUROD4Q9HD90 DUX4L8-201ENST00000629013 1275 ntBASIC19.48■□□□□ 0.71
NEUROD4Q9HD90 DUX4L3-201ENST00000630187 1275 ntBASIC19.48■□□□□ 0.71
NEUROD4Q9HD90 DUX4L7-201ENST00000630678 1275 ntBASIC19.48■□□□□ 0.71
NEUROD4Q9HD90 DUX4L5-201ENST00000630834 1275 ntBASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms