Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.31■■□□□ 1
IFT43Q96FT9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.31■■□□□ 1
IFT43Q96FT9 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.31■■□□□ 1
IFT43Q96FT9 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.3■■□□□ 1
IFT43Q96FT9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
IFT43Q96FT9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.3■■□□□ 1
IFT43Q96FT9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.3■■□□□ 1
IFT43Q96FT9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.3■■□□□ 1
IFT43Q96FT9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
IFT43Q96FT9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
IFT43Q96FT9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.3■■□□□ 1
IFT43Q96FT9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.3■■□□□ 1
IFT43Q96FT9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.3■■□□□ 1
IFT43Q96FT9 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.3■■□□□ 1
IFT43Q96FT9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.3■■□□□ 1
IFT43Q96FT9 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
IFT43Q96FT9 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
IFT43Q96FT9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.3■■□□□ 1
IFT43Q96FT9 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.3■■□□□ 1
IFT43Q96FT9 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.3■■□□□ 1
IFT43Q96FT9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
IFT43Q96FT9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
IFT43Q96FT9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
IFT43Q96FT9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
IFT43Q96FT9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
IFT43Q96FT9 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.29■■□□□ 1
IFT43Q96FT9 AC026185.1-201ENST00000445748 174 ntBASIC21.29■■□□□ 1
IFT43Q96FT9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
IFT43Q96FT9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.29■■□□□ 1
IFT43Q96FT9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.29■■□□□ 1
IFT43Q96FT9 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.29■■□□□ 1
IFT43Q96FT9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
IFT43Q96FT9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.29■■□□□ 1
IFT43Q96FT9 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
IFT43Q96FT9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
IFT43Q96FT9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
IFT43Q96FT9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
IFT43Q96FT9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
IFT43Q96FT9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
IFT43Q96FT9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.29■■□□□ 1
IFT43Q96FT9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.29■■□□□ 1
IFT43Q96FT9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
IFT43Q96FT9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
IFT43Q96FT9 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.28■■□□□ 1
IFT43Q96FT9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.28■■□□□ 1
IFT43Q96FT9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
IFT43Q96FT9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.28■■□□□ 1
IFT43Q96FT9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
IFT43Q96FT9 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.28■■□□□ 1
IFT43Q96FT9 AC026310.3-201ENST00000625186 2373 ntBASIC21.28■■□□□ 1
IFT43Q96FT9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
IFT43Q96FT9 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.28■■□□□ 1
IFT43Q96FT9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.28■■□□□ 1
IFT43Q96FT9 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.28■■□□□ 1
IFT43Q96FT9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.28■■□□□ 1
IFT43Q96FT9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.28■■□□□ 1
IFT43Q96FT9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
IFT43Q96FT9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.28■■□□□ 1
IFT43Q96FT9 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
IFT43Q96FT9 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.28■■□□□ 1
IFT43Q96FT9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.28■■□□□ 1
IFT43Q96FT9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.28■■□□□ 1
IFT43Q96FT9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.28■■□□□ 1
IFT43Q96FT9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.28■■□□□ 1
IFT43Q96FT9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.28■■□□□ 1
IFT43Q96FT9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
IFT43Q96FT9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
IFT43Q96FT9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.27■■□□□ 1
IFT43Q96FT9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
IFT43Q96FT9 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
IFT43Q96FT9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
IFT43Q96FT9 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.27■■□□□ 1
IFT43Q96FT9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
IFT43Q96FT9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
IFT43Q96FT9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.27■□□□□ 0.99
IFT43Q96FT9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.27■□□□□ 0.99
IFT43Q96FT9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
IFT43Q96FT9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
IFT43Q96FT9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
IFT43Q96FT9 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
IFT43Q96FT9 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
IFT43Q96FT9 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
IFT43Q96FT9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
IFT43Q96FT9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
IFT43Q96FT9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
IFT43Q96FT9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.26■□□□□ 0.99
IFT43Q96FT9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.26■□□□□ 0.99
IFT43Q96FT9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.26■□□□□ 0.99
IFT43Q96FT9 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.26■□□□□ 0.99
IFT43Q96FT9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.26■□□□□ 0.99
IFT43Q96FT9 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.26■□□□□ 0.99
IFT43Q96FT9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
IFT43Q96FT9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
IFT43Q96FT9 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
IFT43Q96FT9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
IFT43Q96FT9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
IFT43Q96FT9 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
IFT43Q96FT9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
IFT43Q96FT9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.25■□□□□ 0.99
IFT43Q96FT9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms