Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE2Q96FN4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE2Q96FN4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE2Q96FN4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CPNE2Q96FN4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE2Q96FN4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE2Q96FN4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.94■□□□□ 0.46
CPNE2Q96FN4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
CPNE2Q96FN4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE2Q96FN4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.94■□□□□ 0.46
CPNE2Q96FN4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CPNE2Q96FN4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE2Q96FN4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE2Q96FN4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE2Q96FN4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CPNE2Q96FN4 BX005040.4-201ENST00000637145 1518 ntBASIC17.93■□□□□ 0.46
CPNE2Q96FN4 AC055733.4-201ENST00000638462 1354 ntBASIC17.93■□□□□ 0.46
CPNE2Q96FN4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CPNE2Q96FN4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CPNE2Q96FN4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE2Q96FN4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE2Q96FN4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE2Q96FN4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CPNE2Q96FN4 AC099791.1-201ENST00000416440 715 ntBASIC17.93■□□□□ 0.46
CPNE2Q96FN4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.93■□□□□ 0.46
CPNE2Q96FN4 AC131212.1-201ENST00000613771 668 ntBASIC17.93■□□□□ 0.46
CPNE2Q96FN4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CPNE2Q96FN4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CPNE2Q96FN4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.93■□□□□ 0.46
CPNE2Q96FN4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE2Q96FN4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CPNE2Q96FN4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE2Q96FN4 TSPY26P-201ENST00000476365 1326 ntBASIC17.93■□□□□ 0.46
CPNE2Q96FN4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE2Q96FN4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE2Q96FN4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE2Q96FN4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.92■□□□□ 0.46
CPNE2Q96FN4 AC008406.3-201ENST00000620001 1374 ntBASIC17.92■□□□□ 0.46
CPNE2Q96FN4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE2Q96FN4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE2Q96FN4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE2Q96FN4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
CPNE2Q96FN4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE2Q96FN4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CPNE2Q96FN4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE2Q96FN4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.92■□□□□ 0.46
CPNE2Q96FN4 EDA-201ENST00000338901 1233 ntBASIC17.92■□□□□ 0.46
CPNE2Q96FN4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.92■□□□□ 0.46
CPNE2Q96FN4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.92■□□□□ 0.46
CPNE2Q96FN4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.92■□□□□ 0.46
CPNE2Q96FN4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE2Q96FN4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.92■□□□□ 0.46
CPNE2Q96FN4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE2Q96FN4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE2Q96FN4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE2Q96FN4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE2Q96FN4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CPNE2Q96FN4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CPNE2Q96FN4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE2Q96FN4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE2Q96FN4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE2Q96FN4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE2Q96FN4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
CPNE2Q96FN4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE2Q96FN4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE2Q96FN4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CPNE2Q96FN4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE2Q96FN4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.91■□□□□ 0.46
CPNE2Q96FN4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
CPNE2Q96FN4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.91■□□□□ 0.46
CPNE2Q96FN4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE2Q96FN4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE2Q96FN4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE2Q96FN4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.91■□□□□ 0.46
CPNE2Q96FN4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE2Q96FN4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE2Q96FN4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE2Q96FN4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE2Q96FN4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.91■□□□□ 0.46
CPNE2Q96FN4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.91■□□□□ 0.46
CPNE2Q96FN4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE2Q96FN4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE2Q96FN4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CPNE2Q96FN4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE2Q96FN4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CPNE2Q96FN4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE2Q96FN4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE2Q96FN4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.9■□□□□ 0.46
CPNE2Q96FN4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.9■□□□□ 0.46
CPNE2Q96FN4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE2Q96FN4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.9■□□□□ 0.46
CPNE2Q96FN4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.9■□□□□ 0.46
CPNE2Q96FN4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE2Q96FN4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.9■□□□□ 0.46
CPNE2Q96FN4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.9■□□□□ 0.46
CPNE2Q96FN4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.9■□□□□ 0.46
CPNE2Q96FN4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CPNE2Q96FN4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE2Q96FN4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE2Q96FN4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms