Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDND2Q8NHS1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDND2Q8NHS1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDND2Q8NHS1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.59■□□□□ 0.41
CLDND2Q8NHS1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CLDND2Q8NHS1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.59■□□□□ 0.41
CLDND2Q8NHS1 AL138781.1-201ENST00000566567 1274 ntBASIC17.59■□□□□ 0.41
CLDND2Q8NHS1 AC133552.2-202ENST00000575694 574 ntBASIC17.59■□□□□ 0.41
CLDND2Q8NHS1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.59■□□□□ 0.41
CLDND2Q8NHS1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDND2Q8NHS1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDND2Q8NHS1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDND2Q8NHS1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLDND2Q8NHS1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLDND2Q8NHS1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.58■□□□□ 0.41
CLDND2Q8NHS1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.58■□□□□ 0.41
CLDND2Q8NHS1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
CLDND2Q8NHS1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLDND2Q8NHS1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLDND2Q8NHS1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
CLDND2Q8NHS1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLDND2Q8NHS1 AC068338.2-201ENST00000563278 1430 ntBASIC17.58■□□□□ 0.41
CLDND2Q8NHS1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDND2Q8NHS1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.58■□□□□ 0.4
CLDND2Q8NHS1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLDND2Q8NHS1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.58■□□□□ 0.4
CLDND2Q8NHS1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CLDND2Q8NHS1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CLDND2Q8NHS1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.58■□□□□ 0.4
CLDND2Q8NHS1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.58■□□□□ 0.4
CLDND2Q8NHS1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.58■□□□□ 0.4
CLDND2Q8NHS1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CLDND2Q8NHS1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDND2Q8NHS1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDND2Q8NHS1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.58■□□□□ 0.4
CLDND2Q8NHS1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
CLDND2Q8NHS1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDND2Q8NHS1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDND2Q8NHS1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CLDND2Q8NHS1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDND2Q8NHS1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLDND2Q8NHS1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDND2Q8NHS1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CLDND2Q8NHS1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.57■□□□□ 0.4
CLDND2Q8NHS1 CYP2T1P-201ENST00000432607 1285 ntBASIC17.57■□□□□ 0.4
CLDND2Q8NHS1 AC007322.4-201ENST00000509611 723 ntBASIC17.57■□□□□ 0.4
CLDND2Q8NHS1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDND2Q8NHS1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLDND2Q8NHS1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.57■□□□□ 0.4
CLDND2Q8NHS1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CLDND2Q8NHS1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLDND2Q8NHS1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLDND2Q8NHS1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDND2Q8NHS1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CLDND2Q8NHS1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDND2Q8NHS1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDND2Q8NHS1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.56■□□□□ 0.4
CLDND2Q8NHS1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.56■□□□□ 0.4
CLDND2Q8NHS1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.56■□□□□ 0.4
CLDND2Q8NHS1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CLDND2Q8NHS1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDND2Q8NHS1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CLDND2Q8NHS1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.56■□□□□ 0.4
CLDND2Q8NHS1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.56■□□□□ 0.4
CLDND2Q8NHS1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.56■□□□□ 0.4
CLDND2Q8NHS1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.56■□□□□ 0.4
CLDND2Q8NHS1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.56■□□□□ 0.4
CLDND2Q8NHS1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.56■□□□□ 0.4
CLDND2Q8NHS1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDND2Q8NHS1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDND2Q8NHS1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDND2Q8NHS1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.56■□□□□ 0.4
CLDND2Q8NHS1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CLDND2Q8NHS1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CLDND2Q8NHS1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLDND2Q8NHS1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDND2Q8NHS1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDND2Q8NHS1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.55■□□□□ 0.4
CLDND2Q8NHS1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDND2Q8NHS1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.55■□□□□ 0.4
CLDND2Q8NHS1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.55■□□□□ 0.4
CLDND2Q8NHS1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDND2Q8NHS1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDND2Q8NHS1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDND2Q8NHS1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDND2Q8NHS1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDND2Q8NHS1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDND2Q8NHS1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDND2Q8NHS1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.55■□□□□ 0.4
CLDND2Q8NHS1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDND2Q8NHS1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDND2Q8NHS1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDND2Q8NHS1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDND2Q8NHS1 AC003102.1-202ENST00000563394 1796 ntBASIC17.55■□□□□ 0.4
CLDND2Q8NHS1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CLDND2Q8NHS1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDND2Q8NHS1 AC080038.3-201ENST00000623346 1952 ntBASIC17.55■□□□□ 0.4
CLDND2Q8NHS1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDND2Q8NHS1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CLDND2Q8NHS1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms