Protein–RNA interactions for Protein: P38798

NMD2, Nonsense-mediated mRNA decay protein 2, yeastyeast

Known RBP Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NMD2P38798 RIM9YMR063W 720 nt3.9□□□□□ -1.79
NMD2P38798 YOL085W-AYOL085W-A 213 nt3.9□□□□□ -1.79
NMD2P38798 YOR169CYOR169C 465 nt3.9□□□□□ -1.79
NMD2P38798 DOA4YDR069C 2781 nt3.9□□□□□ -1.79
NMD2P38798 SPR3YGR059W 1539 nt3.9□□□□□ -1.79
NMD2P38798 VTC4YJL012C 2166 nt3.89□□□□□ -1.79
NMD2P38798 YIL068W-AYIL068W-A 384 nt3.89□□□□□ -1.79
NMD2P38798 YKR051WYKR051W 1257 nt3.89□□□□□ -1.79
NMD2P38798 YLR154C-HYLR154C-H 132 nt3.89□□□□□ -1.79
NMD2P38798 YLR156C-AYLR156C-A 132 nt3.89□□□□□ -1.79
NMD2P38798 YLR157C-CYLR157C-C 132 nt3.89□□□□□ -1.79
NMD2P38798 YLR159C-AYLR159C-A 132 nt3.89□□□□□ -1.79
NMD2P38798 YNL043CYNL043C 321 nt3.89□□□□□ -1.79
NMD2P38798 MED1YPR070W 1701 nt3.89□□□□□ -1.79
NMD2P38798 CIN8YEL061C 3003 nt3.89□□□□□ -1.79
NMD2P38798 YKL100CYKL100C 1764 nt3.89□□□□□ -1.79
NMD2P38798 YEL025CYEL025C 3567 nt3.88□□□□□ -1.79
NMD2P38798 RIX1YHR197W 2292 nt3.88□□□□□ -1.79
NMD2P38798 CHA4YLR098C 1947 nt3.88□□□□□ -1.79
NMD2P38798 BET4YJL031C 984 nt3.88□□□□□ -1.79
NMD2P38798 RPS21AYKR057W 264 nt3.88□□□□□ -1.79
NMD2P38798 UBX4YMR067C 1251 nt3.88□□□□□ -1.79
NMD2P38798 RPN1YHR027C 2982 nt3.88□□□□□ -1.79
NMD2P38798 YOR343W-AYOR343W-A 1317 nt3.88□□□□□ -1.79
NMD2P38798 TAF2YCR042C 4224 nt3.88□□□□□ -1.79
NMD2P38798 NMA111YNL123W 2994 nt3.87□□□□□ -1.79
NMD2P38798 ALY1YKR021W 2748 nt3.87□□□□□ -1.79
NMD2P38798 MIT1YEL007W 2001 nt3.87□□□□□ -1.79
NMD2P38798 RPL30YGL030W 318 nt3.87□□□□□ -1.79
NMD2P38798 YGL063C-AYGL063C-A 150 nt3.87□□□□□ -1.79
NMD2P38798 YNR034W-AYNR034W-A 297 nt3.87□□□□□ -1.79
NMD2P38798 HEM4YOR278W 828 nt3.87□□□□□ -1.79
NMD2P38798 RPL20BYOR312C 519 nt3.87□□□□□ -1.79
NMD2P38798 YOR364WYOR364W 369 nt3.87□□□□□ -1.79
NMD2P38798 TFC1YBR123C 1950 nt3.87□□□□□ -1.79
NMD2P38798 YTA7YGR270W 4140 nt3.87□□□□□ -1.79
NMD2P38798 CDH1YGL003C 1701 nt3.87□□□□□ -1.79
NMD2P38798 YDL180WYDL180W 1644 nt3.86□□□□□ -1.79
NMD2P38798 YDR090CYDR090C 933 nt3.86□□□□□ -1.79
NMD2P38798 MET32YDR253C 576 nt3.86□□□□□ -1.79
NMD2P38798 PUG1YER185W 912 nt3.86□□□□□ -1.79
NMD2P38798 YGR242WYGR242W 309 nt3.86□□□□□ -1.79
NMD2P38798 EAF6YJR082C 342 nt3.86□□□□□ -1.79
NMD2P38798 YLR252WYLR252W 306 nt3.86□□□□□ -1.79
NMD2P38798 BER1YLR412W 825 nt3.86□□□□□ -1.79
NMD2P38798 CEP3YMR168C 1827 nt3.86□□□□□ -1.79
NMD2P38798 VHR2YER064C 1518 nt3.85□□□□□ -1.79
NMD2P38798 TCP1YDR212W 1680 nt3.85□□□□□ -1.79
NMD2P38798 DNM1YLL001W 2274 nt3.85□□□□□ -1.79
NMD2P38798 RPS26BYER131W 360 nt3.85□□□□□ -1.79
NMD2P38798 YGR290WYGR290W 444 nt3.85□□□□□ -1.79
NMD2P38798 CIC1YHR052W 1131 nt3.85□□□□□ -1.79
NMD2P38798 DAD2YKR083C 402 nt3.85□□□□□ -1.79
NMD2P38798 AIM36YMR157C 768 nt3.85□□□□□ -1.79
NMD2P38798 GAL7YBR018C 1101 nt3.85□□□□□ -1.79
NMD2P38798 GCN1YGL195W 8019 nt3.85□□□□□ -1.79
NMD2P38798 RRI2YOL117W 1938 nt3.85□□□□□ -1.79
NMD2P38798 YCK2YNL154C 1641 nt3.84□□□□□ -1.79
NMD2P38798 YMR317WYMR317W 3423 nt3.84□□□□□ -1.79
NMD2P38798 YDR220CYDR220C 294 nt3.84□□□□□ -1.79
NMD2P38798 PAU10YDR542W 363 nt3.84□□□□□ -1.79
NMD2P38798 PAU11YGL261C 363 nt3.84□□□□□ -1.79
NMD2P38798 RSR1YGR152C 819 nt3.84□□□□□ -1.79
NMD2P38798 YIR020CYIR020C 303 nt3.84□□□□□ -1.79
NMD2P38798 PAU4YLR461W 363 nt3.84□□□□□ -1.79
NMD2P38798 YBL065WYBL065W 345 nt3.84□□□□□ -1.79
NMD2P38798 VID24YBR105C 1089 nt3.84□□□□□ -1.79
NMD2P38798 ARP4YJL081C 1470 nt3.84□□□□□ -1.8
NMD2P38798 MET5YJR137C 4329 nt3.84□□□□□ -1.8
NMD2P38798 VAS1YGR094W 3315 nt3.83□□□□□ -1.8
NMD2P38798 YHR080CYHR080C 4038 nt3.83□□□□□ -1.8
NMD2P38798 APC11YDL008W 498 nt3.83□□□□□ -1.8
NMD2P38798 YOL019W-AYOL019W-A 153 nt3.83□□□□□ -1.8
NMD2P38798 YOR331CYOR331C 558 nt3.83□□□□□ -1.8
NMD2P38798 PCI8YIL071C 1335 nt3.83□□□□□ -1.8
NMD2P38798 ICR1ICR1 3199 nt3.83□□□□□ -1.8
NMD2P38798 SPO71YDR104C 3738 nt3.83□□□□□ -1.8
NMD2P38798 BOI1YBL085W 2943 nt3.82□□□□□ -1.8
NMD2P38798 MES1YGR264C 2256 nt3.82□□□□□ -1.8
NMD2P38798 YDL009CYDL009C 324 nt3.82□□□□□ -1.8
NMD2P38798 YMR144WYMR144W 1029 nt3.82□□□□□ -1.8
NMD2P38798 PHO80YOL001W 882 nt3.82□□□□□ -1.8
NMD2P38798 TOA1YOR194C 861 nt3.82□□□□□ -1.8
NMD2P38798 DUF1YOL087C 3351 nt3.81□□□□□ -1.8
NMD2P38798 ERG28YER044C 447 nt3.81□□□□□ -1.8
NMD2P38798 PRM8YGL053W 714 nt3.81□□□□□ -1.8
NMD2P38798 AFB1YLR040C 675 nt3.81□□□□□ -1.8
NMD2P38798 ATP19YOL077W-A 207 nt3.81□□□□□ -1.8
NMD2P38798 snR191snR191 274 nt3.81□□□□□ -1.8
NMD2P38798 DAL5YJR152W 1632 nt3.81□□□□□ -1.8
NMD2P38798 CDC55YGL190C 1581 nt3.8□□□□□ -1.8
NMD2P38798 YDR199WYDR199W 366 nt3.8□□□□□ -1.8
NMD2P38798 YMR304C-AYMR304C-A 351 nt3.8□□□□□ -1.8
NMD2P38798 YNL122CYNL122C 348 nt3.8□□□□□ -1.8
NMD2P38798 YOR032W-AYOR032W-A 201 nt3.8□□□□□ -1.8
NMD2P38798 OST2YOR103C 393 nt3.8□□□□□ -1.8
NMD2P38798 snR42snR42 351 nt3.8□□□□□ -1.8
NMD2P38798 STT4YLR305C 5703 nt3.8□□□□□ -1.8
NMD2P38798 STE6YKL209C 3873 nt3.8□□□□□ -1.8
NMD2P38798 MET10YFR030W 3108 nt3.79□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 18.5 ms