Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDGFAP04085 POU5F1P4-201ENST00000413175 1085 ntBASIC19.35■□□□□ 0.69
PDGFAP04085 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PDGFAP04085 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PDGFAP04085 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDGFAP04085 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.35■□□□□ 0.69
PDGFAP04085 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PDGFAP04085 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PDGFAP04085 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PDGFAP04085 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.35■□□□□ 0.69
PDGFAP04085 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDGFAP04085 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDGFAP04085 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.35■□□□□ 0.69
PDGFAP04085 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
PDGFAP04085 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDGFAP04085 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PDGFAP04085 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.34■□□□□ 0.69
PDGFAP04085 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.34■□□□□ 0.69
PDGFAP04085 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFAP04085 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
PDGFAP04085 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
PDGFAP04085 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFAP04085 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.34■□□□□ 0.69
PDGFAP04085 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.34■□□□□ 0.69
PDGFAP04085 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.34■□□□□ 0.69
PDGFAP04085 AL162412.1-201ENST00000567129 965 ntBASIC19.34■□□□□ 0.69
PDGFAP04085 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.34■□□□□ 0.69
PDGFAP04085 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFAP04085 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PDGFAP04085 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFAP04085 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFAP04085 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
PDGFAP04085 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.33■□□□□ 0.69
PDGFAP04085 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDGFAP04085 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.33■□□□□ 0.69
PDGFAP04085 AC061975.6-201ENST00000579045 1553 ntBASIC19.33■□□□□ 0.69
PDGFAP04085 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
PDGFAP04085 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.33■□□□□ 0.69
PDGFAP04085 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFAP04085 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFAP04085 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFAP04085 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.33■□□□□ 0.68
PDGFAP04085 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.33■□□□□ 0.68
PDGFAP04085 RPS2P4-201ENST00000476944 856 ntBASIC19.33■□□□□ 0.68
PDGFAP04085 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFAP04085 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.33■□□□□ 0.68
PDGFAP04085 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.33■□□□□ 0.68
PDGFAP04085 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.33■□□□□ 0.68
PDGFAP04085 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.33■□□□□ 0.68
PDGFAP04085 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PDGFAP04085 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.33■□□□□ 0.68
PDGFAP04085 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
PDGFAP04085 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PDGFAP04085 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.33■□□□□ 0.68
PDGFAP04085 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFAP04085 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFAP04085 KRT16P2-201ENST00000414673 1423 ntBASIC19.33■□□□□ 0.68
PDGFAP04085 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.33■□□□□ 0.68
PDGFAP04085 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.32■□□□□ 0.68
PDGFAP04085 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFAP04085 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.32■□□□□ 0.68
PDGFAP04085 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFAP04085 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFAP04085 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFAP04085 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFAP04085 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PDGFAP04085 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.32■□□□□ 0.68
PDGFAP04085 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFAP04085 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFAP04085 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFAP04085 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.32■□□□□ 0.68
PDGFAP04085 AC026366.1-201ENST00000488803 879 ntBASIC19.32■□□□□ 0.68
PDGFAP04085 UNC93B5-201ENST00000530315 699 ntBASIC19.32■□□□□ 0.68
PDGFAP04085 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PDGFAP04085 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFAP04085 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFAP04085 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.32■□□□□ 0.68
PDGFAP04085 AC073648.6-201ENST00000641589 218 ntBASIC19.32■□□□□ 0.68
PDGFAP04085 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.32■□□□□ 0.68
PDGFAP04085 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.32■□□□□ 0.68
PDGFAP04085 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFAP04085 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFAP04085 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFAP04085 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFAP04085 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
PDGFAP04085 AC073130.3-201ENST00000624389 2278 ntBASIC19.31■□□□□ 0.68
PDGFAP04085 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDGFAP04085 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.31■□□□□ 0.68
PDGFAP04085 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.31■□□□□ 0.68
PDGFAP04085 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.31■□□□□ 0.68
PDGFAP04085 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.31■□□□□ 0.68
PDGFAP04085 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.31■□□□□ 0.68
PDGFAP04085 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.31■□□□□ 0.68
PDGFAP04085 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDGFAP04085 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PDGFAP04085 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDGFAP04085 AC087742.1-201ENST00000575880 1738 ntBASIC19.31■□□□□ 0.68
PDGFAP04085 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDGFAP04085 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.3■□□□□ 0.68
PDGFAP04085 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms