Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Hdac3O88895 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac3O88895 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.2■□□□□ 0.18
Hdac3O88895 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac3O88895 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Hdac3O88895 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac3O88895 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac3O88895 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac3O88895 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac3O88895 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac3O88895 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Hdac3O88895 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac3O88895 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac3O88895 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.2■□□□□ 0.18
Hdac3O88895 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac3O88895 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac3O88895 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Hdac3O88895 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac3O88895 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac3O88895 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Hdac3O88895 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac3O88895 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac3O88895 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac3O88895 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.19■□□□□ 0.18
Hdac3O88895 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac3O88895 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.19■□□□□ 0.18
Hdac3O88895 Gm10033-202ENSMUST00000211874 928 ntBASIC16.19■□□□□ 0.18
Hdac3O88895 Gm18671-201ENSMUST00000214826 683 ntBASIC16.19■□□□□ 0.18
Hdac3O88895 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac3O88895 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.19■□□□□ 0.18
Hdac3O88895 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
Hdac3O88895 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Hdac3O88895 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.19■□□□□ 0.18
Hdac3O88895 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac3O88895 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac3O88895 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hdac3O88895 Haglr-201ENSMUST00000100000 2085 ntBASIC16.18■□□□□ 0.18
Hdac3O88895 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Hdac3O88895 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hdac3O88895 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hdac3O88895 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hdac3O88895 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hdac3O88895 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Hdac3O88895 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hdac3O88895 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hdac3O88895 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hdac3O88895 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.18■□□□□ 0.18
Hdac3O88895 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hdac3O88895 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.18■□□□□ 0.18
Hdac3O88895 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hdac3O88895 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hdac3O88895 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hdac3O88895 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hdac3O88895 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hdac3O88895 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hdac3O88895 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hdac3O88895 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hdac3O88895 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hdac3O88895 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hdac3O88895 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hdac3O88895 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.17■□□□□ 0.18
Hdac3O88895 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hdac3O88895 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hdac3O88895 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hdac3O88895 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.17■□□□□ 0.18
Hdac3O88895 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.17■□□□□ 0.18
Hdac3O88895 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hdac3O88895 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hdac3O88895 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hdac3O88895 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
Hdac3O88895 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.17■□□□□ 0.18
Hdac3O88895 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hdac3O88895 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hdac3O88895 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hdac3O88895 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hdac3O88895 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hdac3O88895 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hdac3O88895 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hdac3O88895 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
Hdac3O88895 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.16■□□□□ 0.18
Hdac3O88895 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hdac3O88895 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hdac3O88895 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hdac3O88895 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Hdac3O88895 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hdac3O88895 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.15■□□□□ 0.18
Hdac3O88895 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hdac3O88895 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hdac3O88895 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.15■□□□□ 0.18
Hdac3O88895 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.15■□□□□ 0.18
Hdac3O88895 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hdac3O88895 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hdac3O88895 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hdac3O88895 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hdac3O88895 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hdac3O88895 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hdac3O88895 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hdac3O88895 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hdac3O88895 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hdac3O88895 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.14■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms