Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.76■□□□□ 0.59
SMAD9O15198 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMAD9O15198 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMAD9O15198 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.76■□□□□ 0.59
SMAD9O15198 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.76■□□□□ 0.59
SMAD9O15198 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.76■□□□□ 0.59
SMAD9O15198 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMAD9O15198 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMAD9O15198 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMAD9O15198 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMAD9O15198 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.76■□□□□ 0.59
SMAD9O15198 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMAD9O15198 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMAD9O15198 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SMAD9O15198 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
SMAD9O15198 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMAD9O15198 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SMAD9O15198 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMAD9O15198 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMAD9O15198 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
SMAD9O15198 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMAD9O15198 Z98882.1-201ENST00000622160 2253 ntBASIC18.75■□□□□ 0.59
SMAD9O15198 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SMAD9O15198 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.75■□□□□ 0.59
SMAD9O15198 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMAD9O15198 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.75■□□□□ 0.59
SMAD9O15198 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SMAD9O15198 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMAD9O15198 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SMAD9O15198 KRT18P11-201ENST00000435214 1283 ntBASIC18.75■□□□□ 0.59
SMAD9O15198 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.75■□□□□ 0.59
SMAD9O15198 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.75■□□□□ 0.59
SMAD9O15198 AC120498.10-201ENST00000621827 505 ntBASIC18.75■□□□□ 0.59
SMAD9O15198 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.75■□□□□ 0.59
SMAD9O15198 MYCNOS-205ENST00000641950 531 ntBASIC18.75■□□□□ 0.59
SMAD9O15198 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SMAD9O15198 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.75■□□□□ 0.59
SMAD9O15198 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
SMAD9O15198 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMAD9O15198 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMAD9O15198 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMAD9O15198 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.75■□□□□ 0.59
SMAD9O15198 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMAD9O15198 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.75■□□□□ 0.59
SMAD9O15198 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMAD9O15198 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SMAD9O15198 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMAD9O15198 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.74■□□□□ 0.59
SMAD9O15198 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMAD9O15198 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.74■□□□□ 0.59
SMAD9O15198 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMAD9O15198 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.74■□□□□ 0.59
SMAD9O15198 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.74■□□□□ 0.59
SMAD9O15198 AL137784.2-201ENST00000607332 1000 ntBASIC18.74■□□□□ 0.59
SMAD9O15198 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.74■□□□□ 0.59
SMAD9O15198 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMAD9O15198 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMAD9O15198 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.74■□□□□ 0.59
SMAD9O15198 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SMAD9O15198 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMAD9O15198 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SMAD9O15198 KRT16P2-201ENST00000414673 1423 ntBASIC18.74■□□□□ 0.59
SMAD9O15198 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMAD9O15198 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMAD9O15198 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SMAD9O15198 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.73■□□□□ 0.59
SMAD9O15198 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.73■□□□□ 0.59
SMAD9O15198 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SMAD9O15198 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMAD9O15198 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMAD9O15198 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMAD9O15198 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.73■□□□□ 0.59
SMAD9O15198 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SMAD9O15198 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SMAD9O15198 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SMAD9O15198 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
SMAD9O15198 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SMAD9O15198 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.73■□□□□ 0.59
SMAD9O15198 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.73■□□□□ 0.59
SMAD9O15198 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.73■□□□□ 0.59
SMAD9O15198 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.73■□□□□ 0.59
SMAD9O15198 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMAD9O15198 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SMAD9O15198 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SMAD9O15198 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SMAD9O15198 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMAD9O15198 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SMAD9O15198 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMAD9O15198 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
SMAD9O15198 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SMAD9O15198 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMAD9O15198 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMAD9O15198 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMAD9O15198 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMAD9O15198 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMAD9O15198 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMAD9O15198 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.72■□□□□ 0.59
SMAD9O15198 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.72■□□□□ 0.59
SMAD9O15198 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.72■□□□□ 0.59
SMAD9O15198 SLC7A5P1-201ENST00000568957 537 ntBASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms