Protein–RNA interactions for Protein: A0A0J9YWB2

TRBV7-9, T-cell receptor beta variable 7-9 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-9A0A0J9YWB2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC15.45■□□□□ 0.06
TRBV7-9A0A0J9YWB2 AC008764.7-201ENST00000593779 1081 ntBASIC15.45■□□□□ 0.06
TRBV7-9A0A0J9YWB2 AC106739.1-201ENST00000617035 715 ntBASIC15.45■□□□□ 0.06
TRBV7-9A0A0J9YWB2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV7-9A0A0J9YWB2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV7-9A0A0J9YWB2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC15.45■□□□□ 0.06
TRBV7-9A0A0J9YWB2 RASA4CP-201ENST00000424092 1398 ntBASIC15.45■□□□□ 0.06
TRBV7-9A0A0J9YWB2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TRBV7-9A0A0J9YWB2 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV7-9A0A0J9YWB2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC15.45■□□□□ 0.06
TRBV7-9A0A0J9YWB2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV7-9A0A0J9YWB2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC15.45■□□□□ 0.06
TRBV7-9A0A0J9YWB2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV7-9A0A0J9YWB2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC15.45■□□□□ 0.06
TRBV7-9A0A0J9YWB2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV7-9A0A0J9YWB2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TRBV7-9A0A0J9YWB2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV7-9A0A0J9YWB2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 AP005212.1-201ENST00000581547 1997 ntBASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 PLK5-205ENST00000642079 1969 ntBASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV7-9A0A0J9YWB2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV7-9A0A0J9YWB2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV7-9A0A0J9YWB2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV7-9A0A0J9YWB2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV7-9A0A0J9YWB2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV7-9A0A0J9YWB2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TRBV7-9A0A0J9YWB2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
TRBV7-9A0A0J9YWB2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV7-9A0A0J9YWB2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV7-9A0A0J9YWB2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV7-9A0A0J9YWB2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV7-9A0A0J9YWB2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV7-9A0A0J9YWB2 AL355001.2-201ENST00000620617 1191 ntBASIC15.43■□□□□ 0.06
TRBV7-9A0A0J9YWB2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC15.43■□□□□ 0.06
TRBV7-9A0A0J9YWB2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC15.43■□□□□ 0.06
TRBV7-9A0A0J9YWB2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV7-9A0A0J9YWB2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV7-9A0A0J9YWB2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
TRBV7-9A0A0J9YWB2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV7-9A0A0J9YWB2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC15.43■□□□□ 0.06
TRBV7-9A0A0J9YWB2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV7-9A0A0J9YWB2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV7-9A0A0J9YWB2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV7-9A0A0J9YWB2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRBV7-9A0A0J9YWB2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV7-9A0A0J9YWB2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
TRBV7-9A0A0J9YWB2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV7-9A0A0J9YWB2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV7-9A0A0J9YWB2 AP004607.4-201ENST00000530158 1459 ntBASIC15.42■□□□□ 0.06
TRBV7-9A0A0J9YWB2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV7-9A0A0J9YWB2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV7-9A0A0J9YWB2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRBV7-9A0A0J9YWB2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRBV7-9A0A0J9YWB2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC15.42■□□□□ 0.06
TRBV7-9A0A0J9YWB2 AC091305.1-201ENST00000479476 895 ntBASIC15.42■□□□□ 0.06
TRBV7-9A0A0J9YWB2 AC012414.1-201ENST00000556676 535 ntBASIC15.42■□□□□ 0.06
TRBV7-9A0A0J9YWB2 GRAMD4P4-201ENST00000613563 1115 ntBASIC15.42■□□□□ 0.06
TRBV7-9A0A0J9YWB2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV7-9A0A0J9YWB2 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV7-9A0A0J9YWB2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV7-9A0A0J9YWB2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV7-9A0A0J9YWB2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV7-9A0A0J9YWB2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV7-9A0A0J9YWB2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV7-9A0A0J9YWB2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV7-9A0A0J9YWB2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV7-9A0A0J9YWB2 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.42■□□□□ 0.06
TRBV7-9A0A0J9YWB2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TRBV7-9A0A0J9YWB2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV7-9A0A0J9YWB2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV7-9A0A0J9YWB2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms