Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRAV34A0A0B4J273 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV34A0A0B4J273 PLK5-205ENST00000642079 1969 ntBASIC16■□□□□ 0.15
TRAV34A0A0B4J273 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV34A0A0B4J273 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRAV34A0A0B4J273 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV34A0A0B4J273 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRAV34A0A0B4J273 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV34A0A0B4J273 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV34A0A0B4J273 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV34A0A0B4J273 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV34A0A0B4J273 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TRAV34A0A0B4J273 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV34A0A0B4J273 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV34A0A0B4J273 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
TRAV34A0A0B4J273 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV34A0A0B4J273 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV34A0A0B4J273 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TRAV34A0A0B4J273 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV34A0A0B4J273 Z92544.1-202ENST00000571933 1220 ntBASIC15.99■□□□□ 0.15
TRAV34A0A0B4J273 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV34A0A0B4J273 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
TRAV34A0A0B4J273 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAV34A0A0B4J273 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAV34A0A0B4J273 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV34A0A0B4J273 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV34A0A0B4J273 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV34A0A0B4J273 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV34A0A0B4J273 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV34A0A0B4J273 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
TRAV34A0A0B4J273 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAV34A0A0B4J273 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV34A0A0B4J273 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV34A0A0B4J273 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV34A0A0B4J273 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV34A0A0B4J273 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV34A0A0B4J273 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV34A0A0B4J273 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAV34A0A0B4J273 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV34A0A0B4J273 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV34A0A0B4J273 RBM38-205ENST00000440234 686 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV34A0A0B4J273 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV34A0A0B4J273 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV34A0A0B4J273 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRAV34A0A0B4J273 pRNA.6-201ENST00000610482 90 ntBASIC15.98■□□□□ 0.15
TRAV34A0A0B4J273 pRNA.5-201ENST00000612139 90 ntBASIC15.98■□□□□ 0.15
TRAV34A0A0B4J273 pRNA.11-201ENST00000618423 90 ntBASIC15.98■□□□□ 0.15
TRAV34A0A0B4J273 pRNA.13-201ENST00000619112 90 ntBASIC15.98■□□□□ 0.15
TRAV34A0A0B4J273 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV34A0A0B4J273 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAV34A0A0B4J273 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV34A0A0B4J273 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV34A0A0B4J273 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
TRAV34A0A0B4J273 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV34A0A0B4J273 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TRAV34A0A0B4J273 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV34A0A0B4J273 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV34A0A0B4J273 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV34A0A0B4J273 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV34A0A0B4J273 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRAV34A0A0B4J273 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
TRAV34A0A0B4J273 AC026471.1-201ENST00000564629 3026 ntBASIC15.97■□□□□ 0.15
TRAV34A0A0B4J273 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV34A0A0B4J273 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV34A0A0B4J273 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TRAV34A0A0B4J273 RNF146-205ENST00000477776 762 ntTSL 3 BASIC15.97■□□□□ 0.15
TRAV34A0A0B4J273 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV34A0A0B4J273 KRT125P-201ENST00000546827 989 ntBASIC15.97■□□□□ 0.15
TRAV34A0A0B4J273 EXOG-217ENST00000630638 197 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV34A0A0B4J273 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV34A0A0B4J273 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV34A0A0B4J273 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV34A0A0B4J273 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV34A0A0B4J273 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV34A0A0B4J273 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV34A0A0B4J273 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV34A0A0B4J273 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV34A0A0B4J273 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV34A0A0B4J273 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV34A0A0B4J273 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
TRAV34A0A0B4J273 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV34A0A0B4J273 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV34A0A0B4J273 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TRAV34A0A0B4J273 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV34A0A0B4J273 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV34A0A0B4J273 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV34A0A0B4J273 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TRAV34A0A0B4J273 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TRAV34A0A0B4J273 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TRAV34A0A0B4J273 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TRAV34A0A0B4J273 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV34A0A0B4J273 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TRAV34A0A0B4J273 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TRAV34A0A0B4J273 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TRAV34A0A0B4J273 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TRAV34A0A0B4J273 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAV34A0A0B4J273 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV34A0A0B4J273 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV34A0A0B4J273 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV34A0A0B4J273 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms