Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 DDR1-AS1-206ENST00000458361 3994 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 ARMT1-201ENST00000367294 2576 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 FAM124B-202ENST00000389874 2594 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 THNSL2-201ENST00000324166 3649 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 CCDC181-207ENST00000545005 2035 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 DHRS9-208ENST00000602501 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 SLN-201ENST00000305991 722 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 CLEC4C-201ENST00000354629 1126 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 TP53TG3C-201ENST00000360260 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 RNA5SP298-201ENST00000364991 111 ntBASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 FCER1G-202ENST00000367992 551 ntTSL 3 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 SCG5-202ENST00000413748 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 CYP4F62P-201ENST00000417310 524 ntBASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 AL035411.1-201ENST00000427762 690 ntBASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 TPTE2P1-202ENST00000429698 770 ntTSL 3 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 AC012456.2-201ENST00000431500 561 ntTSL 5 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 BSN-AS1-201ENST00000442384 461 ntTSL 3 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 AP000561.1-201ENST00000444130 435 ntTSL 5 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 LINC02248-202ENST00000451579 606 ntTSL 3 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 MEMO1P1-201ENST00000452572 888 ntBASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 AL445220.1-201ENST00000456309 559 ntBASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 RN7SL567P-201ENST00000462015 303 ntBASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 RPL34P18-201ENST00000466433 354 ntBASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 RN7SL762P-201ENST00000469864 289 ntBASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 AC105416.1-201ENST00000506991 842 ntBASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 AC067930.1-201ENST00000517300 291 ntBASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 AC013643.1-201ENST00000518155 310 ntBASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 CA3-AS1-202ENST00000521761 591 ntTSL 4 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 SLN-203ENST00000531293 906 ntAPPRIS P1 TSL 4 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 PLBD1-AS1-201ENST00000542401 539 ntTSL 4 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 AC107241.1-201ENST00000560280 434 ntTSL 3 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 TP53TG3-208ENST00000569420 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 TP53TG3B-205ENST00000569741 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 LRRC75A-AS1-223ENST00000581361 843 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 AC005381.1-204ENST00000585697 599 ntTSL 3 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 BOLA2P2-202ENST00000604904 567 ntBASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 AL138995.1-201ENST00000614633 675 ntBASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 FO538757.2-201ENST00000624431 570 ntBASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 LINC00694-203ENST00000636468 808 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 ZNF823-201ENST00000341191 2423 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 USP17L13-201ENST00000429667 1593 ntAPPRIS P2 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 USP17L11-201ENST00000457736 1593 ntAPPRIS P2 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 USP17L30-201ENST00000504104 1593 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 USP17L18-201ENST00000504209 1593 ntAPPRIS P2 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 USP17L24-201ENST00000504481 1593 ntAPPRIS P2 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 USP17L28-201ENST00000504543 1593 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 USP17L20-201ENST00000506151 1593 ntAPPRIS P2 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 USP17L16P-201ENST00000507155 1593 ntBASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 USP17L5-201ENST00000507227 1593 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 USP17L9P-201ENST00000508843 1593 ntBASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 USP17L25-201ENST00000509271 1593 ntAPPRIS P2 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 USP17L26-201ENST00000509660 1593 ntAPPRIS P2 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 USP17L22-201ENST00000511280 1593 ntAPPRIS P2 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 USP17L17-201ENST00000511568 1593 ntAPPRIS P2 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 USP17L29-201ENST00000511681 1593 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 USP17L19-201ENST00000515566 1593 ntAPPRIS P2 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 USP17L27-201ENST00000515574 1593 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 ADAM22-205ENST00000398209 9144 ntAPPRIS P4 TSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 AARS2-201ENST00000244571 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 DENND2C-201ENST00000393274 6163 ntTSL 5 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 ACAD10-203ENST00000455480 4071 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 PSMF1-203ENST00000335877 4290 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 FMN1-207ENST00000559047 4260 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 LIMCH1-202ENST00000381753 5705 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 HMGCR-201ENST00000287936 4585 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 SMIM7-221ENST00000627144 2171 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 DDX11-201ENST00000228264 3717 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 GBA-202ENST00000368373 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 AC005618.2-201ENST00000618012 2297 ntBASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 SCAF4-203ENST00000434667 3846 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 TMPRSS7-205ENST00000617607 2377 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 KBTBD12-204ENST00000407609 4302 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 HIVEP2-201ENST00000012134 9755 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 LINC01498-201ENST00000502160 2984 ntTSL 5 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 ICAM1-201ENST00000264832 3252 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 OR52B5P-203ENST00000641694 1313 ntBASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 ZDHHC11B-202ENST00000508859 1631 ntAPPRIS P5 TSL 5 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 C15orf32-202ENST00000624458 1749 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 HTR3B-201ENST00000260191 2011 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 AL109615.3-201ENST00000422059 2232 ntTSL 2 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 C11orf57-203ENST00000420986 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 NPAS3-205ENST00000547068 2531 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 TM2D1-202ENST00000371177 3218 ntTSL 5 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 MROH8-203ENST00000400441 3345 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 ABCC11-201ENST00000353782 4463 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 RUFY2-213ENST00000602465 3863 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 AC011095.1-201ENST00000584677 2794 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 HPSE2-203ENST00000370552 2295 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 LINC01281-202ENST00000448597 1773 ntTSL 2 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 MBIP-201ENST00000318473 1586 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 SNORA80C-201ENST00000362917 135 ntBASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 CIART-202ENST00000369094 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 TRMT13-201ENST00000370139 711 ntTSL 3 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 PADI4-202ENST00000375453 841 ntTSL 2 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 KRTAP9-7-201ENST00000391354 1039 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 RPL12P47-201ENST00000406185 127 ntBASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 AL137222.1-201ENST00000407765 1162 ntBASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 EIF4E2-206ENST00000409495 1014 ntTSL 2 BASIC9.05□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 521 ms