Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm6631-201ENSMUST00000193699 559 ntBASIC9.97□□□□□ -0.81
Cux1P53564 Gm37375-201ENSMUST00000193859 387 ntBASIC9.97□□□□□ -0.81
Cux1P53564 Gm37385-201ENSMUST00000195223 387 ntBASIC9.97□□□□□ -0.81
Cux1P53564 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Cux1P53564 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC9.97□□□□□ -0.81
Cux1P53564 Gm4742-201ENSMUST00000200261 771 ntBASIC9.97□□□□□ -0.81
Cux1P53564 Gm43798-201ENSMUST00000202056 394 ntBASIC9.97□□□□□ -0.81
Cux1P53564 Gm44251-201ENSMUST00000204963 442 ntBASIC9.97□□□□□ -0.81
Cux1P53564 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Cux1P53564 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Cux1P53564 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cux1P53564 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cux1P53564 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cux1P53564 Gm9403-201ENSMUST00000196299 2181 ntBASIC9.96□□□□□ -0.81
Cux1P53564 Gm10650-202ENSMUST00000196581 1969 ntBASIC9.96□□□□□ -0.81
Cux1P53564 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Cux1P53564 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Cux1P53564 Gm37100-201ENSMUST00000193344 1353 ntBASIC9.96□□□□□ -0.81
Cux1P53564 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cux1P53564 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC9.96□□□□□ -0.81
Cux1P53564 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cux1P53564 AC166358.5-201ENSMUST00000220706 1302 ntBASIC9.96□□□□□ -0.82
Cux1P53564 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cux1P53564 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cux1P53564 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cux1P53564 Gm15781-201ENSMUST00000120216 323 ntBASIC9.96□□□□□ -0.82
Cux1P53564 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC9.96□□□□□ -0.82
Cux1P53564 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Cux1P53564 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Cux1P53564 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC9.96□□□□□ -0.82
Cux1P53564 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC9.96□□□□□ -0.82
Cux1P53564 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Cux1P53564 Gm37203-201ENSMUST00000191618 385 ntBASIC9.96□□□□□ -0.82
Cux1P53564 Gm19653-201ENSMUST00000204326 1039 ntBASIC9.96□□□□□ -0.82
Cux1P53564 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cux1P53564 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cux1P53564 Prdm16-206ENSMUST00000105638 8601 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Cux1P53564 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cux1P53564 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Cux1P53564 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cux1P53564 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cux1P53564 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cux1P53564 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cux1P53564 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC9.95□□□□□ -0.82
Cux1P53564 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Cux1P53564 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cux1P53564 Gm5401-201ENSMUST00000122444 365 ntBASIC9.95□□□□□ -0.82
Cux1P53564 Gm22724-201ENSMUST00000158091 127 ntBASIC9.95□□□□□ -0.82
Cux1P53564 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cux1P53564 Tab3-201ENSMUST00000048250 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cux1P53564 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cux1P53564 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Cux1P53564 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Cux1P53564 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Cux1P53564 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Cux1P53564 Akap2-206ENSMUST00000107598 6830 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cux1P53564 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cux1P53564 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cux1P53564 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC9.95□□□□□ -0.82
Cux1P53564 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Cux1P53564 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cux1P53564 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cux1P53564 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cux1P53564 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cux1P53564 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cux1P53564 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC9.94□□□□□ -0.82
Cux1P53564 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cux1P53564 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cux1P53564 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cux1P53564 Gm12937-201ENSMUST00000118333 448 ntBASIC9.94□□□□□ -0.82
Cux1P53564 Gm15078-201ENSMUST00000118371 782 ntBASIC9.94□□□□□ -0.82
Cux1P53564 Gm13013-201ENSMUST00000119087 523 ntBASIC9.94□□□□□ -0.82
Cux1P53564 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC9.94□□□□□ -0.82
Cux1P53564 Gm22094-201ENSMUST00000158976 117 ntBASIC9.94□□□□□ -0.82
Cux1P53564 Gm37609-201ENSMUST00000191778 678 ntBASIC9.94□□□□□ -0.82
Cux1P53564 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC9.94□□□□□ -0.82
Cux1P53564 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC9.94□□□□□ -0.82
Cux1P53564 Gm45850-201ENSMUST00000212536 338 ntBASIC9.94□□□□□ -0.82
Cux1P53564 Gm19116-201ENSMUST00000218592 642 ntBASIC9.94□□□□□ -0.82
Cux1P53564 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cux1P53564 Gm9088-201ENSMUST00000220237 508 ntBASIC9.94□□□□□ -0.82
Cux1P53564 AC122251.2-201ENSMUST00000227341 603 ntBASIC9.94□□□□□ -0.82
Cux1P53564 AC154616.2-201ENSMUST00000227978 398 ntBASIC9.94□□□□□ -0.82
Cux1P53564 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC9.94□□□□□ -0.82
Cux1P53564 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Cux1P53564 Mir298-201ENSMUST00000083476 82 ntBASIC9.94□□□□□ -0.82
Cux1P53564 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Cux1P53564 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cux1P53564 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC9.94□□□□□ -0.82
Cux1P53564 Gm37953-201ENSMUST00000195293 1884 ntBASIC9.94□□□□□ -0.82
Cux1P53564 Gm7048-201ENSMUST00000199395 1891 ntBASIC9.94□□□□□ -0.82
Cux1P53564 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cux1P53564 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Cux1P53564 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC9.94□□□□□ -0.82
Cux1P53564 Gm44898-201ENSMUST00000205934 2223 ntBASIC9.94□□□□□ -0.82
Cux1P53564 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Cux1P53564 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cux1P53564 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Cux1P53564 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cux1P53564 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms