Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.16■□□□□ 0.66
NPIPA1Q9UND3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPA1Q9UND3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPA1Q9UND3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.16■□□□□ 0.66
NPIPA1Q9UND3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.16■□□□□ 0.66
NPIPA1Q9UND3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPA1Q9UND3 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.16■□□□□ 0.66
NPIPA1Q9UND3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.16■□□□□ 0.66
NPIPA1Q9UND3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.16■□□□□ 0.66
NPIPA1Q9UND3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPA1Q9UND3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
NPIPA1Q9UND3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.16■□□□□ 0.66
NPIPA1Q9UND3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPA1Q9UND3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
NPIPA1Q9UND3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPA1Q9UND3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPA1Q9UND3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPA1Q9UND3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPA1Q9UND3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPA1Q9UND3 CLDN5-201ENST00000403084 2357 ntBASIC19.15■□□□□ 0.66
NPIPA1Q9UND3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPA1Q9UND3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPA1Q9UND3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPA1Q9UND3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
NPIPA1Q9UND3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.15■□□□□ 0.66
NPIPA1Q9UND3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPA1Q9UND3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
NPIPA1Q9UND3 KRT18P6-201ENST00000555540 1265 ntBASIC19.15■□□□□ 0.66
NPIPA1Q9UND3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.15■□□□□ 0.66
NPIPA1Q9UND3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.15■□□□□ 0.66
NPIPA1Q9UND3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
NPIPA1Q9UND3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.15■□□□□ 0.66
NPIPA1Q9UND3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPA1Q9UND3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.15■□□□□ 0.66
NPIPA1Q9UND3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.15■□□□□ 0.66
NPIPA1Q9UND3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPA1Q9UND3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPA1Q9UND3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NPIPA1Q9UND3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NPIPA1Q9UND3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
NPIPA1Q9UND3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.14■□□□□ 0.65
NPIPA1Q9UND3 CYP2T1P-201ENST00000432607 1285 ntBASIC19.14■□□□□ 0.65
NPIPA1Q9UND3 AC069152.1-201ENST00000438030 544 ntBASIC19.14■□□□□ 0.65
NPIPA1Q9UND3 TSPY20P-201ENST00000450910 630 ntBASIC19.14■□□□□ 0.65
NPIPA1Q9UND3 TMEM191A-211ENST00000637163 1067 ntBASIC19.14■□□□□ 0.65
NPIPA1Q9UND3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NPIPA1Q9UND3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPIPA1Q9UND3 AC068338.2-201ENST00000563278 1430 ntBASIC19.14■□□□□ 0.65
NPIPA1Q9UND3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPIPA1Q9UND3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPIPA1Q9UND3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
NPIPA1Q9UND3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPIPA1Q9UND3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
NPIPA1Q9UND3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
NPIPA1Q9UND3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPA1Q9UND3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.13■□□□□ 0.65
NPIPA1Q9UND3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPA1Q9UND3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.13■□□□□ 0.65
NPIPA1Q9UND3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.13■□□□□ 0.65
NPIPA1Q9UND3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPA1Q9UND3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
NPIPA1Q9UND3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
NPIPA1Q9UND3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPA1Q9UND3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.13■□□□□ 0.65
NPIPA1Q9UND3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.13■□□□□ 0.65
NPIPA1Q9UND3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.13■□□□□ 0.65
NPIPA1Q9UND3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPA1Q9UND3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPA1Q9UND3 AC133041.1-202ENST00000642053 222 ntBASIC19.13■□□□□ 0.65
NPIPA1Q9UND3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPA1Q9UND3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPA1Q9UND3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.13■□□□□ 0.65
NPIPA1Q9UND3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
NPIPA1Q9UND3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPA1Q9UND3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPA1Q9UND3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NPIPA1Q9UND3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
NPIPA1Q9UND3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPIPA1Q9UND3 AC244015.2-201ENST00000616358 1861 ntBASIC19.12■□□□□ 0.65
NPIPA1Q9UND3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NPIPA1Q9UND3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPIPA1Q9UND3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NPIPA1Q9UND3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NPIPA1Q9UND3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.12■□□□□ 0.65
NPIPA1Q9UND3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.12■□□□□ 0.65
NPIPA1Q9UND3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.12■□□□□ 0.65
NPIPA1Q9UND3 AC008694.1-202ENST00000636953 945 ntBASIC19.12■□□□□ 0.65
NPIPA1Q9UND3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPIPA1Q9UND3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPIPA1Q9UND3 AC026471.6-201ENST00000622954 1905 ntBASIC19.12■□□□□ 0.65
NPIPA1Q9UND3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPIPA1Q9UND3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPIPA1Q9UND3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.11■□□□□ 0.65
NPIPA1Q9UND3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
NPIPA1Q9UND3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
NPIPA1Q9UND3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPIPA1Q9UND3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.11■□□□□ 0.65
NPIPA1Q9UND3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.11■□□□□ 0.65
NPIPA1Q9UND3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.11■□□□□ 0.65
NPIPA1Q9UND3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms