Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RpgrQ9R0X5 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RpgrQ9R0X5 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RpgrQ9R0X5 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.44■□□□□ 0.54
RpgrQ9R0X5 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RpgrQ9R0X5 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RpgrQ9R0X5 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RpgrQ9R0X5 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.43■□□□□ 0.54
RpgrQ9R0X5 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
RpgrQ9R0X5 Gm10033-202ENSMUST00000211874 928 ntBASIC18.43■□□□□ 0.54
RpgrQ9R0X5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.43■□□□□ 0.54
RpgrQ9R0X5 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.43■□□□□ 0.54
RpgrQ9R0X5 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RpgrQ9R0X5 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
RpgrQ9R0X5 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RpgrQ9R0X5 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RpgrQ9R0X5 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RpgrQ9R0X5 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RpgrQ9R0X5 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RpgrQ9R0X5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RpgrQ9R0X5 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RpgrQ9R0X5 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RpgrQ9R0X5 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RpgrQ9R0X5 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RpgrQ9R0X5 AV356131-201ENSMUST00000206201 750 ntBASIC18.42■□□□□ 0.54
RpgrQ9R0X5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RpgrQ9R0X5 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RpgrQ9R0X5 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RpgrQ9R0X5 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RpgrQ9R0X5 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.41■□□□□ 0.54
RpgrQ9R0X5 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RpgrQ9R0X5 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RpgrQ9R0X5 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RpgrQ9R0X5 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RpgrQ9R0X5 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RpgrQ9R0X5 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RpgrQ9R0X5 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.41■□□□□ 0.54
RpgrQ9R0X5 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.41■□□□□ 0.54
RpgrQ9R0X5 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RpgrQ9R0X5 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RpgrQ9R0X5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RpgrQ9R0X5 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RpgrQ9R0X5 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RpgrQ9R0X5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
RpgrQ9R0X5 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RpgrQ9R0X5 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RpgrQ9R0X5 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RpgrQ9R0X5 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RpgrQ9R0X5 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RpgrQ9R0X5 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RpgrQ9R0X5 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RpgrQ9R0X5 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RpgrQ9R0X5 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RpgrQ9R0X5 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RpgrQ9R0X5 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
RpgrQ9R0X5 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
RpgrQ9R0X5 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RpgrQ9R0X5 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RpgrQ9R0X5 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RpgrQ9R0X5 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
RpgrQ9R0X5 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RpgrQ9R0X5 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RpgrQ9R0X5 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RpgrQ9R0X5 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RpgrQ9R0X5 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RpgrQ9R0X5 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.39■□□□□ 0.53
RpgrQ9R0X5 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RpgrQ9R0X5 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RpgrQ9R0X5 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RpgrQ9R0X5 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RpgrQ9R0X5 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
RpgrQ9R0X5 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RpgrQ9R0X5 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.39■□□□□ 0.53
RpgrQ9R0X5 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.38■□□□□ 0.53
RpgrQ9R0X5 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RpgrQ9R0X5 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RpgrQ9R0X5 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RpgrQ9R0X5 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.38■□□□□ 0.53
RpgrQ9R0X5 Gm42569-201ENSMUST00000200539 472 ntBASIC18.38■□□□□ 0.53
RpgrQ9R0X5 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.38■□□□□ 0.53
RpgrQ9R0X5 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RpgrQ9R0X5 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RpgrQ9R0X5 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.38■□□□□ 0.53
RpgrQ9R0X5 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RpgrQ9R0X5 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RpgrQ9R0X5 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RpgrQ9R0X5 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RpgrQ9R0X5 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RpgrQ9R0X5 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RpgrQ9R0X5 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RpgrQ9R0X5 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RpgrQ9R0X5 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RpgrQ9R0X5 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RpgrQ9R0X5 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RpgrQ9R0X5 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
RpgrQ9R0X5 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RpgrQ9R0X5 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RpgrQ9R0X5 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RpgrQ9R0X5 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RpgrQ9R0X5 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms