Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PARPBPQ9NWS1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.57■□□□□ 0.56
PARPBPQ9NWS1 AL121603.2-201ENST00000557373 2117 ntBASIC18.57■□□□□ 0.56
PARPBPQ9NWS1 BID-214ENST00000617586 542 ntTSL 5 BASIC18.57■□□□□ 0.56
PARPBPQ9NWS1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PARPBPQ9NWS1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PARPBPQ9NWS1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PARPBPQ9NWS1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.57■□□□□ 0.56
PARPBPQ9NWS1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PARPBPQ9NWS1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PARPBPQ9NWS1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PARPBPQ9NWS1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.56■□□□□ 0.56
PARPBPQ9NWS1 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PARPBPQ9NWS1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PARPBPQ9NWS1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PARPBPQ9NWS1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PARPBPQ9NWS1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.56■□□□□ 0.56
PARPBPQ9NWS1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PARPBPQ9NWS1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PARPBPQ9NWS1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.56■□□□□ 0.56
PARPBPQ9NWS1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.56■□□□□ 0.56
PARPBPQ9NWS1 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PARPBPQ9NWS1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.56■□□□□ 0.56
PARPBPQ9NWS1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PARPBPQ9NWS1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
PARPBPQ9NWS1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PARPBPQ9NWS1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PARPBPQ9NWS1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PARPBPQ9NWS1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PARPBPQ9NWS1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.55■□□□□ 0.56
PARPBPQ9NWS1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PARPBPQ9NWS1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PARPBPQ9NWS1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PARPBPQ9NWS1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PARPBPQ9NWS1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.55■□□□□ 0.56
PARPBPQ9NWS1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.55■□□□□ 0.56
PARPBPQ9NWS1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.55■□□□□ 0.56
PARPBPQ9NWS1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.55■□□□□ 0.56
PARPBPQ9NWS1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.55■□□□□ 0.56
PARPBPQ9NWS1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PARPBPQ9NWS1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PARPBPQ9NWS1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
PARPBPQ9NWS1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PARPBPQ9NWS1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PARPBPQ9NWS1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PARPBPQ9NWS1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.55■□□□□ 0.56
PARPBPQ9NWS1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PARPBPQ9NWS1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PARPBPQ9NWS1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PARPBPQ9NWS1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PARPBPQ9NWS1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PARPBPQ9NWS1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PARPBPQ9NWS1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.55■□□□□ 0.56
PARPBPQ9NWS1 AC138932.1-201ENST00000534164 6830 ntBASIC18.54■□□□□ 0.56
PARPBPQ9NWS1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PARPBPQ9NWS1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PARPBPQ9NWS1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PARPBPQ9NWS1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PARPBPQ9NWS1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PARPBPQ9NWS1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PARPBPQ9NWS1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.54■□□□□ 0.56
PARPBPQ9NWS1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.54■□□□□ 0.56
PARPBPQ9NWS1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PARPBPQ9NWS1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PARPBPQ9NWS1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.54■□□□□ 0.56
PARPBPQ9NWS1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.54■□□□□ 0.56
PARPBPQ9NWS1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.54■□□□□ 0.56
PARPBPQ9NWS1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.54■□□□□ 0.56
PARPBPQ9NWS1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.54■□□□□ 0.56
PARPBPQ9NWS1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.54■□□□□ 0.56
PARPBPQ9NWS1 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.54■□□□□ 0.56
PARPBPQ9NWS1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PARPBPQ9NWS1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.54■□□□□ 0.56
PARPBPQ9NWS1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.54■□□□□ 0.56
PARPBPQ9NWS1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.54■□□□□ 0.56
PARPBPQ9NWS1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.54■□□□□ 0.56
PARPBPQ9NWS1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.54■□□□□ 0.56
PARPBPQ9NWS1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PARPBPQ9NWS1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PARPBPQ9NWS1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.54■□□□□ 0.56
PARPBPQ9NWS1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PARPBPQ9NWS1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.53■□□□□ 0.56
PARPBPQ9NWS1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.53■□□□□ 0.56
PARPBPQ9NWS1 Z98882.1-201ENST00000622160 2253 ntBASIC18.53■□□□□ 0.56
PARPBPQ9NWS1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PARPBPQ9NWS1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.53■□□□□ 0.56
PARPBPQ9NWS1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PARPBPQ9NWS1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PARPBPQ9NWS1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.53■□□□□ 0.56
PARPBPQ9NWS1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PARPBPQ9NWS1 AC245052.3-201ENST00000450182 901 ntBASIC18.53■□□□□ 0.56
PARPBPQ9NWS1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.53■□□□□ 0.56
PARPBPQ9NWS1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.53■□□□□ 0.56
PARPBPQ9NWS1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
PARPBPQ9NWS1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PARPBPQ9NWS1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PARPBPQ9NWS1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PARPBPQ9NWS1 IKBKGP1-201ENST00000612193 1073 ntBASIC18.53■□□□□ 0.56
PARPBPQ9NWS1 AC011767.1-201ENST00000617410 1153 ntBASIC18.53■□□□□ 0.56
PARPBPQ9NWS1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms