Protein–RNA interactions for Protein: Q9H0K1

SIK2, Serine/threonine-protein kinase SIK2, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIK2Q9H0K1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIK2Q9H0K1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIK2Q9H0K1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SIK2Q9H0K1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIK2Q9H0K1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
SIK2Q9H0K1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIK2Q9H0K1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIK2Q9H0K1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.59■■□□□ 1.05
SIK2Q9H0K1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SIK2Q9H0K1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.59■■□□□ 1.05
SIK2Q9H0K1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SIK2Q9H0K1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.59■■□□□ 1.05
SIK2Q9H0K1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SIK2Q9H0K1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIK2Q9H0K1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SIK2Q9H0K1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.59■■□□□ 1.05
SIK2Q9H0K1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SIK2Q9H0K1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SIK2Q9H0K1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
SIK2Q9H0K1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.58■■□□□ 1.05
SIK2Q9H0K1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.58■■□□□ 1.05
SIK2Q9H0K1 DUX4L16-201ENST00000555130 1264 ntBASIC21.58■■□□□ 1.05
SIK2Q9H0K1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.58■■□□□ 1.05
SIK2Q9H0K1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.58■■□□□ 1.04
SIK2Q9H0K1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.58■■□□□ 1.04
SIK2Q9H0K1 FEM1AP4-201ENST00000443167 1987 ntBASIC21.57■■□□□ 1.04
SIK2Q9H0K1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SIK2Q9H0K1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SIK2Q9H0K1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SIK2Q9H0K1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
SIK2Q9H0K1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.57■■□□□ 1.04
SIK2Q9H0K1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SIK2Q9H0K1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
SIK2Q9H0K1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SIK2Q9H0K1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SIK2Q9H0K1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.57■■□□□ 1.04
SIK2Q9H0K1 AC245052.3-201ENST00000450182 901 ntBASIC21.57■■□□□ 1.04
SIK2Q9H0K1 TERF1P5-201ENST00000477545 1207 ntBASIC21.57■■□□□ 1.04
SIK2Q9H0K1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.57■■□□□ 1.04
SIK2Q9H0K1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.57■■□□□ 1.04
SIK2Q9H0K1 AC073111.5-205ENST00000641717 521 ntBASIC21.57■■□□□ 1.04
SIK2Q9H0K1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SIK2Q9H0K1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.57■■□□□ 1.04
SIK2Q9H0K1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.57■■□□□ 1.04
SIK2Q9H0K1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SIK2Q9H0K1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SIK2Q9H0K1 RBM17P2-201ENST00000616397 1405 ntBASIC21.56■■□□□ 1.04
SIK2Q9H0K1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SIK2Q9H0K1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SIK2Q9H0K1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SIK2Q9H0K1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.56■■□□□ 1.04
SIK2Q9H0K1 RARRES2P11-201ENST00000635158 484 ntBASIC21.56■■□□□ 1.04
SIK2Q9H0K1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.56■■□□□ 1.04
SIK2Q9H0K1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
SIK2Q9H0K1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SIK2Q9H0K1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.55■■□□□ 1.04
SIK2Q9H0K1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SIK2Q9H0K1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SIK2Q9H0K1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
SIK2Q9H0K1 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.55■■□□□ 1.04
SIK2Q9H0K1 CDCA4P2-201ENST00000441182 718 ntBASIC21.55■■□□□ 1.04
SIK2Q9H0K1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.55■■□□□ 1.04
SIK2Q9H0K1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.55■■□□□ 1.04
SIK2Q9H0K1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.55■■□□□ 1.04
SIK2Q9H0K1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SIK2Q9H0K1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.55■■□□□ 1.04
SIK2Q9H0K1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SIK2Q9H0K1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SIK2Q9H0K1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SIK2Q9H0K1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SIK2Q9H0K1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SIK2Q9H0K1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SIK2Q9H0K1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SIK2Q9H0K1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SIK2Q9H0K1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.54■■□□□ 1.04
SIK2Q9H0K1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SIK2Q9H0K1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SIK2Q9H0K1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.54■■□□□ 1.04
SIK2Q9H0K1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SIK2Q9H0K1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SIK2Q9H0K1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SIK2Q9H0K1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
SIK2Q9H0K1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SIK2Q9H0K1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SIK2Q9H0K1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SIK2Q9H0K1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
SIK2Q9H0K1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.53■■□□□ 1.04
SIK2Q9H0K1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.53■■□□□ 1.04
SIK2Q9H0K1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.53■■□□□ 1.04
SIK2Q9H0K1 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.53■■□□□ 1.04
SIK2Q9H0K1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
SIK2Q9H0K1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SIK2Q9H0K1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SIK2Q9H0K1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SIK2Q9H0K1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SIK2Q9H0K1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SIK2Q9H0K1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.52■■□□□ 1.04
SIK2Q9H0K1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SIK2Q9H0K1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.52■■□□□ 1.04
SIK2Q9H0K1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms