Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.35■□□□□ 0.05
RNF183Q96D59 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF183Q96D59 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF183Q96D59 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RNF183Q96D59 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
RNF183Q96D59 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF183Q96D59 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF183Q96D59 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
RNF183Q96D59 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF183Q96D59 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF183Q96D59 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF183Q96D59 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF183Q96D59 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF183Q96D59 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF183Q96D59 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF183Q96D59 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC15.34■□□□□ 0.05
RNF183Q96D59 AC005181.1-201ENST00000604782 1256 ntBASIC15.34■□□□□ 0.05
RNF183Q96D59 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC15.34■□□□□ 0.05
RNF183Q96D59 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
RNF183Q96D59 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
RNF183Q96D59 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF183Q96D59 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF183Q96D59 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF183Q96D59 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF183Q96D59 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RNF183Q96D59 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.33■□□□□ 0.05
RNF183Q96D59 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RNF183Q96D59 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF183Q96D59 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC15.33■□□□□ 0.04
RNF183Q96D59 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF183Q96D59 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF183Q96D59 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC15.33■□□□□ 0.04
RNF183Q96D59 GPX1P1-201ENST00000388829 606 ntBASIC15.33■□□□□ 0.04
RNF183Q96D59 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF183Q96D59 TERF1P5-201ENST00000477545 1207 ntBASIC15.33■□□□□ 0.04
RNF183Q96D59 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF183Q96D59 AC104771.1-201ENST00000603335 964 ntBASIC15.33■□□□□ 0.04
RNF183Q96D59 AL109923.1-201ENST00000618799 583 ntBASIC15.33■□□□□ 0.04
RNF183Q96D59 AC013268.1-206ENST00000638368 961 ntBASIC15.33■□□□□ 0.04
RNF183Q96D59 AC112229.1-201ENST00000639295 961 ntBASIC15.33■□□□□ 0.04
RNF183Q96D59 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF183Q96D59 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF183Q96D59 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF183Q96D59 RARG-204ENST00000543726 1779 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF183Q96D59 AC003102.1-202ENST00000563394 1796 ntBASIC15.33■□□□□ 0.04
RNF183Q96D59 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF183Q96D59 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RNF183Q96D59 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
RNF183Q96D59 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF183Q96D59 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF183Q96D59 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RNF183Q96D59 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF183Q96D59 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF183Q96D59 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RNF183Q96D59 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF183Q96D59 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF183Q96D59 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF183Q96D59 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
RNF183Q96D59 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC15.32■□□□□ 0.04
RNF183Q96D59 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF183Q96D59 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RNF183Q96D59 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF183Q96D59 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
RNF183Q96D59 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC15.32■□□□□ 0.04
RNF183Q96D59 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC15.32■□□□□ 0.04
RNF183Q96D59 AL121832.2-201ENST00000610979 668 ntBASIC15.32■□□□□ 0.04
RNF183Q96D59 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF183Q96D59 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF183Q96D59 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RNF183Q96D59 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF183Q96D59 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF183Q96D59 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RNF183Q96D59 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF183Q96D59 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF183Q96D59 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
RNF183Q96D59 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF183Q96D59 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF183Q96D59 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF183Q96D59 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RNF183Q96D59 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF183Q96D59 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF183Q96D59 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF183Q96D59 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
RNF183Q96D59 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF183Q96D59 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RNF183Q96D59 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF183Q96D59 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RNF183Q96D59 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF183Q96D59 BMP1-204ENST00000397814 836 ntTSL 4 BASIC15.31■□□□□ 0.04
RNF183Q96D59 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF183Q96D59 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF183Q96D59 CNN2P6-201ENST00000439038 900 ntBASIC15.31■□□□□ 0.04
RNF183Q96D59 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF183Q96D59 WT1-AS_3.1-201ENST00000613262 234 ntBASIC15.31■□□□□ 0.04
RNF183Q96D59 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF183Q96D59 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF183Q96D59 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF183Q96D59 KRT16P2-201ENST00000414673 1423 ntBASIC15.31■□□□□ 0.04
RNF183Q96D59 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF183Q96D59 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms