Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga4Q91XY4 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga4Q91XY4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga4Q91XY4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga4Q91XY4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga4Q91XY4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga4Q91XY4 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Pcdhga4Q91XY4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga4Q91XY4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.86■□□□□ 0.45
Pcdhga4Q91XY4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga4Q91XY4 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga4Q91XY4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga4Q91XY4 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga4Q91XY4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga4Q91XY4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pcdhga4Q91XY4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga4Q91XY4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga4Q91XY4 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga4Q91XY4 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga4Q91XY4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga4Q91XY4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhga4Q91XY4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhga4Q91XY4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhga4Q91XY4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhga4Q91XY4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.85■□□□□ 0.45
Pcdhga4Q91XY4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhga4Q91XY4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Pcdhga4Q91XY4 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.85■□□□□ 0.45
Pcdhga4Q91XY4 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Pcdhga4Q91XY4 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.85■□□□□ 0.45
Pcdhga4Q91XY4 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhga4Q91XY4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.85■□□□□ 0.45
Pcdhga4Q91XY4 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.85■□□□□ 0.45
Pcdhga4Q91XY4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhga4Q91XY4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhga4Q91XY4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Pcdhga4Q91XY4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhga4Q91XY4 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhga4Q91XY4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Pcdhga4Q91XY4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Pcdhga4Q91XY4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga4Q91XY4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga4Q91XY4 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga4Q91XY4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga4Q91XY4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Pcdhga4Q91XY4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Pcdhga4Q91XY4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga4Q91XY4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga4Q91XY4 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Pcdhga4Q91XY4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga4Q91XY4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Pcdhga4Q91XY4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga4Q91XY4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga4Q91XY4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga4Q91XY4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga4Q91XY4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga4Q91XY4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga4Q91XY4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhga4Q91XY4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhga4Q91XY4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga4Q91XY4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga4Q91XY4 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.83■□□□□ 0.44
Pcdhga4Q91XY4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga4Q91XY4 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga4Q91XY4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga4Q91XY4 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga4Q91XY4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga4Q91XY4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Pcdhga4Q91XY4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga4Q91XY4 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Pcdhga4Q91XY4 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga4Q91XY4 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga4Q91XY4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Pcdhga4Q91XY4 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga4Q91XY4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga4Q91XY4 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga4Q91XY4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga4Q91XY4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga4Q91XY4 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga4Q91XY4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga4Q91XY4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga4Q91XY4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga4Q91XY4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga4Q91XY4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.82■□□□□ 0.44
Pcdhga4Q91XY4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.82■□□□□ 0.44
Pcdhga4Q91XY4 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga4Q91XY4 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga4Q91XY4 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga4Q91XY4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga4Q91XY4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga4Q91XY4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Pcdhga4Q91XY4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga4Q91XY4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga4Q91XY4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga4Q91XY4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga4Q91XY4 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga4Q91XY4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhga4Q91XY4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga4Q91XY4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga4Q91XY4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms