Protein–RNA interactions for Protein: Q5T2R2

PDSS1, Decaprenyl-diphosphate synthase subunit 1, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDSS1Q5T2R2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDSS1Q5T2R2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
PDSS1Q5T2R2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDSS1Q5T2R2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.83■□□□□ 0.6
PDSS1Q5T2R2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDSS1Q5T2R2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDSS1Q5T2R2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDSS1Q5T2R2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.83■□□□□ 0.6
PDSS1Q5T2R2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.83■□□□□ 0.6
PDSS1Q5T2R2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.83■□□□□ 0.6
PDSS1Q5T2R2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.83■□□□□ 0.6
PDSS1Q5T2R2 SLC7A5P2-201ENST00000553010 536 ntBASIC18.83■□□□□ 0.6
PDSS1Q5T2R2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.83■□□□□ 0.6
PDSS1Q5T2R2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PDSS1Q5T2R2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.83■□□□□ 0.6
PDSS1Q5T2R2 AC092437.1-201ENST00000624794 1048 ntBASIC18.83■□□□□ 0.6
PDSS1Q5T2R2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDSS1Q5T2R2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PDSS1Q5T2R2 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.83■□□□□ 0.6
PDSS1Q5T2R2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDSS1Q5T2R2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDSS1Q5T2R2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDSS1Q5T2R2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDSS1Q5T2R2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDSS1Q5T2R2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDSS1Q5T2R2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
PDSS1Q5T2R2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.83■□□□□ 0.6
PDSS1Q5T2R2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PDSS1Q5T2R2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDSS1Q5T2R2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDSS1Q5T2R2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PDSS1Q5T2R2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDSS1Q5T2R2 AC061975.6-201ENST00000579045 1553 ntBASIC18.82■□□□□ 0.6
PDSS1Q5T2R2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDSS1Q5T2R2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDSS1Q5T2R2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDSS1Q5T2R2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.82■□□□□ 0.6
PDSS1Q5T2R2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDSS1Q5T2R2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.82■□□□□ 0.6
PDSS1Q5T2R2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.82■□□□□ 0.6
PDSS1Q5T2R2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.82■□□□□ 0.6
PDSS1Q5T2R2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.82■□□□□ 0.6
PDSS1Q5T2R2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDSS1Q5T2R2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.82■□□□□ 0.6
PDSS1Q5T2R2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
PDSS1Q5T2R2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PDSS1Q5T2R2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDSS1Q5T2R2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDSS1Q5T2R2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDSS1Q5T2R2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PDSS1Q5T2R2 AC244015.2-201ENST00000616358 1861 ntBASIC18.82■□□□□ 0.6
PDSS1Q5T2R2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDSS1Q5T2R2 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDSS1Q5T2R2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDSS1Q5T2R2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.81■□□□□ 0.6
PDSS1Q5T2R2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PDSS1Q5T2R2 AL137060.1-201ENST00000618151 2648 ntBASIC18.81■□□□□ 0.6
PDSS1Q5T2R2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDSS1Q5T2R2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.81■□□□□ 0.6
PDSS1Q5T2R2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDSS1Q5T2R2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDSS1Q5T2R2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDSS1Q5T2R2 AC092667.1-201ENST00000434301 2586 ntBASIC18.81■□□□□ 0.6
PDSS1Q5T2R2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDSS1Q5T2R2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
PDSS1Q5T2R2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDSS1Q5T2R2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDSS1Q5T2R2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.81■□□□□ 0.6
PDSS1Q5T2R2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.81■□□□□ 0.6
PDSS1Q5T2R2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.81■□□□□ 0.6
PDSS1Q5T2R2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDSS1Q5T2R2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDSS1Q5T2R2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDSS1Q5T2R2 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDSS1Q5T2R2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.81■□□□□ 0.6
PDSS1Q5T2R2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDSS1Q5T2R2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.81■□□□□ 0.6
PDSS1Q5T2R2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.81■□□□□ 0.6
PDSS1Q5T2R2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PDSS1Q5T2R2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDSS1Q5T2R2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.81■□□□□ 0.6
PDSS1Q5T2R2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDSS1Q5T2R2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDSS1Q5T2R2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDSS1Q5T2R2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PDSS1Q5T2R2 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDSS1Q5T2R2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.8■□□□□ 0.6
PDSS1Q5T2R2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDSS1Q5T2R2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PDSS1Q5T2R2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDSS1Q5T2R2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDSS1Q5T2R2 AC245052.3-201ENST00000450182 901 ntBASIC18.8■□□□□ 0.6
PDSS1Q5T2R2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.8■□□□□ 0.6
PDSS1Q5T2R2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.8■□□□□ 0.6
PDSS1Q5T2R2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.8■□□□□ 0.6
PDSS1Q5T2R2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.8■□□□□ 0.6
PDSS1Q5T2R2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.8■□□□□ 0.6
PDSS1Q5T2R2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.8■□□□□ 0.6
PDSS1Q5T2R2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PDSS1Q5T2R2 AC080038.1-201ENST00000611274 1154 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms