Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-3Q5R1C3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-3Q5R1C3 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-3Q5R1C3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav3-3Q5R1C3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav3-3Q5R1C3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-3Q5R1C3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-3Q5R1C3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-3Q5R1C3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-3Q5R1C3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-3Q5R1C3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-3Q5R1C3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-3Q5R1C3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-3Q5R1C3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav3-3Q5R1C3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav3-3Q5R1C3 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-3Q5R1C3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-3Q5R1C3 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav3-3Q5R1C3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-3Q5R1C3 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-3Q5R1C3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-3Q5R1C3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-3Q5R1C3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-3Q5R1C3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-3Q5R1C3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-3Q5R1C3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav3-3Q5R1C3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav3-3Q5R1C3 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-3Q5R1C3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-3Q5R1C3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-3Q5R1C3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-3Q5R1C3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-3Q5R1C3 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-3Q5R1C3 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-3Q5R1C3 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-3Q5R1C3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav3-3Q5R1C3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-3Q5R1C3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC13.65□□□□□ -0.22
Trav3-3Q5R1C3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav3-3Q5R1C3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav3-3Q5R1C3 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav3-3Q5R1C3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-3Q5R1C3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-3Q5R1C3 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-3Q5R1C3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-3Q5R1C3 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-3Q5R1C3 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav3-3Q5R1C3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-3Q5R1C3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.65□□□□□ -0.22
Trav3-3Q5R1C3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-3Q5R1C3 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-3Q5R1C3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Trav3-3Q5R1C3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Trav3-3Q5R1C3 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trav3-3Q5R1C3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav3-3Q5R1C3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav3-3Q5R1C3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-3Q5R1C3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-3Q5R1C3 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav3-3Q5R1C3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav3-3Q5R1C3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav3-3Q5R1C3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav3-3Q5R1C3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Trav3-3Q5R1C3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-3Q5R1C3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Trav3-3Q5R1C3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-3Q5R1C3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav3-3Q5R1C3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav3-3Q5R1C3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-3Q5R1C3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav3-3Q5R1C3 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-3Q5R1C3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-3Q5R1C3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-3Q5R1C3 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.64□□□□□ -0.23
Trav3-3Q5R1C3 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-3Q5R1C3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-3Q5R1C3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-3Q5R1C3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-3Q5R1C3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav3-3Q5R1C3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-3Q5R1C3 Gm43213-201ENSMUST00000151866 1790 ntBASIC13.63□□□□□ -0.23
Trav3-3Q5R1C3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav3-3Q5R1C3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-3Q5R1C3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-3Q5R1C3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-3Q5R1C3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-3Q5R1C3 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-3Q5R1C3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-3Q5R1C3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Trav3-3Q5R1C3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-3Q5R1C3 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-3Q5R1C3 Mir6236-201ENSMUST00000184437 123 ntBASIC13.63□□□□□ -0.23
Trav3-3Q5R1C3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav3-3Q5R1C3 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-3Q5R1C3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-3Q5R1C3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-3Q5R1C3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-3Q5R1C3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-3Q5R1C3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-3Q5R1C3 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms