Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH1Q08174 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDH1Q08174 AC121338.2-201ENST00000622535 1744 ntBASIC20.04■□□□□ 0.8
PCDH1Q08174 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PCDH1Q08174 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH1Q08174 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PCDH1Q08174 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PCDH1Q08174 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PCDH1Q08174 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH1Q08174 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDH1Q08174 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH1Q08174 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH1Q08174 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PCDH1Q08174 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PCDH1Q08174 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDH1Q08174 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.03■□□□□ 0.8
PCDH1Q08174 MIR6821-201ENST00000617625 74 ntBASIC20.03■□□□□ 0.8
PCDH1Q08174 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH1Q08174 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH1Q08174 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH1Q08174 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDH1Q08174 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH1Q08174 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH1Q08174 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PCDH1Q08174 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PCDH1Q08174 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH1Q08174 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH1Q08174 AC011484.1-201ENST00000377652 1995 ntBASIC20.03■□□□□ 0.8
PCDH1Q08174 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH1Q08174 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
PCDH1Q08174 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
PCDH1Q08174 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.02■□□□□ 0.8
PCDH1Q08174 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH1Q08174 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH1Q08174 KRT18P61-201ENST00000585825 1298 ntBASIC20.02■□□□□ 0.8
PCDH1Q08174 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDH1Q08174 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDH1Q08174 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDH1Q08174 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH1Q08174 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH1Q08174 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH1Q08174 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PCDH1Q08174 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDH1Q08174 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.02■□□□□ 0.79
PCDH1Q08174 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH1Q08174 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH1Q08174 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH1Q08174 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH1Q08174 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDH1Q08174 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.01■□□□□ 0.79
PCDH1Q08174 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDH1Q08174 AC243732.1-201ENST00000612648 864 ntBASIC20.01■□□□□ 0.79
PCDH1Q08174 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDH1Q08174 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH1Q08174 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH1Q08174 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH1Q08174 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH1Q08174 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20■□□□□ 0.79
PCDH1Q08174 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH1Q08174 SLC25A24-204ENST00000569674 2357 ntBASIC20■□□□□ 0.79
PCDH1Q08174 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH1Q08174 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH1Q08174 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20■□□□□ 0.79
PCDH1Q08174 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH1Q08174 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDH1Q08174 KRT19P1-201ENST00000405746 1186 ntBASIC20■□□□□ 0.79
PCDH1Q08174 SLC7A5P2-201ENST00000553010 536 ntBASIC20■□□□□ 0.79
PCDH1Q08174 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH1Q08174 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH1Q08174 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH1Q08174 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH1Q08174 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH1Q08174 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDH1Q08174 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
PCDH1Q08174 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH1Q08174 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PCDH1Q08174 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDH1Q08174 AC245052.3-201ENST00000450182 901 ntBASIC19.99■□□□□ 0.79
PCDH1Q08174 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDH1Q08174 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDH1Q08174 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.99■□□□□ 0.79
PCDH1Q08174 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PCDH1Q08174 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PCDH1Q08174 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH1Q08174 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH1Q08174 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PCDH1Q08174 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
PCDH1Q08174 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH1Q08174 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
PCDH1Q08174 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH1Q08174 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH1Q08174 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH1Q08174 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH1Q08174 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH1Q08174 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
PCDH1Q08174 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH1Q08174 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
PCDH1Q08174 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH1Q08174 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH1Q08174 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms