Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CHGAP10645 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CHGAP10645 SOX15-203ENST00000570788 1093 ntBASIC30.06■■■□□ 2.4
CHGAP10645 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC30.06■■■□□ 2.4
CHGAP10645 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CHGAP10645 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CHGAP10645 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CHGAP10645 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC30.06■■■□□ 2.4
CHGAP10645 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC30.05■■■□□ 2.4
CHGAP10645 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CHGAP10645 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CHGAP10645 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC30.05■■■□□ 2.4
CHGAP10645 RNF121-214ENST00000533380 870 ntTSL 3 BASIC30.05■■■□□ 2.4
CHGAP10645 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC30.05■■■□□ 2.4
CHGAP10645 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC30.05■■■□□ 2.4
CHGAP10645 SPIB-206ENST00000596074 847 ntTSL 2 BASIC30.05■■■□□ 2.4
CHGAP10645 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CHGAP10645 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC30.05■■■□□ 2.4
CHGAP10645 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
CHGAP10645 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CHGAP10645 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC30.05■■■□□ 2.4
CHGAP10645 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC30.04■■■□□ 2.4
CHGAP10645 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CHGAP10645 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CHGAP10645 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC30.04■■■□□ 2.4
CHGAP10645 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
CHGAP10645 PTPA-214ENST00000423100 988 ntTSL 2 BASIC30.04■■■□□ 2.4
CHGAP10645 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC30.04■■■□□ 2.4
CHGAP10645 REXO2-208ENST00000539754 791 ntTSL 2 BASIC30.04■■■□□ 2.4
CHGAP10645 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC30.04■■■□□ 2.4
CHGAP10645 NARF-205ENST00000412079 1760 ntTSL 5 BASIC30.04■■■□□ 2.4
CHGAP10645 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
CHGAP10645 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC30.04■■■□□ 2.4
CHGAP10645 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC30.03■■■□□ 2.4
CHGAP10645 C9orf163-202ENST00000624034 2573 ntBASIC30.03■■■□□ 2.4
CHGAP10645 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CHGAP10645 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
CHGAP10645 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC30.03■■■□□ 2.4
CHGAP10645 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC30.03■■■□□ 2.4
CHGAP10645 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC30.03■■■□□ 2.4
CHGAP10645 OR2A1-AS1-207ENST00000486094 819 ntBASIC30.03■■■□□ 2.4
CHGAP10645 RN7SL471P-201ENST00000580476 299 ntBASIC30.03■■■□□ 2.4
CHGAP10645 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC30.03■■■□□ 2.4
CHGAP10645 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CHGAP10645 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CHGAP10645 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CHGAP10645 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CHGAP10645 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CHGAP10645 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CHGAP10645 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC30.02■■■□□ 2.4
CHGAP10645 SLC29A4P2-201ENST00000504749 1089 ntBASIC30.02■■■□□ 2.4
CHGAP10645 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC30.02■■■□□ 2.4
CHGAP10645 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC30.02■■■□□ 2.4
CHGAP10645 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC30.02■■■□□ 2.4
CHGAP10645 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CHGAP10645 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
CHGAP10645 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC30.01■■■□□ 2.4
CHGAP10645 FAM99A-202ENST00000538190 1989 ntBASIC30.01■■■□□ 2.4
CHGAP10645 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC30.01■■■□□ 2.39
CHGAP10645 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CHGAP10645 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CHGAP10645 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC30.01■■■□□ 2.39
CHGAP10645 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC30.01■■■□□ 2.39
CHGAP10645 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC30.01■■■□□ 2.39
CHGAP10645 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
CHGAP10645 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
CHGAP10645 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CHGAP10645 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC30.01■■■□□ 2.39
CHGAP10645 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
CHGAP10645 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CHGAP10645 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC30■■■□□ 2.39
CHGAP10645 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC30■■■□□ 2.39
CHGAP10645 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC30■■■□□ 2.39
CHGAP10645 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC30■■■□□ 2.39
CHGAP10645 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CHGAP10645 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CHGAP10645 MIR718-201ENST00000390190 70 ntBASIC30■■■□□ 2.39
CHGAP10645 SAPCD2P1-201ENST00000395413 1184 ntBASIC30■■■□□ 2.39
CHGAP10645 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC30■■■□□ 2.39
CHGAP10645 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC30■■■□□ 2.39
CHGAP10645 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
CHGAP10645 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC30■■■□□ 2.39
CHGAP10645 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC30■■■□□ 2.39
CHGAP10645 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC30■■■□□ 2.39
CHGAP10645 Z99916.2-201ENST00000604037 246 ntBASIC30■■■□□ 2.39
CHGAP10645 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC30■■■□□ 2.39
CHGAP10645 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC30■■■□□ 2.39
CHGAP10645 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC30■■■□□ 2.39
CHGAP10645 CYP21A1P-202ENST00000354927 1481 ntBASIC29.99■■■□□ 2.39
CHGAP10645 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CHGAP10645 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC29.99■■■□□ 2.39
CHGAP10645 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC29.99■■■□□ 2.39
CHGAP10645 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC29.99■■■□□ 2.39
CHGAP10645 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CHGAP10645 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CHGAP10645 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC29.99■■■□□ 2.39
CHGAP10645 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
CHGAP10645 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC29.99■■■□□ 2.39
CHGAP10645 STX5-203ENST00000394690 1568 ntTSL 5 BASIC29.98■■■□□ 2.39
CHGAP10645 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms