Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC23.63■■□□□ 1.37
HOXC6P09630 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC23.63■■□□□ 1.37
HOXC6P09630 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.63■■□□□ 1.37
HOXC6P09630 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.63■■□□□ 1.37
HOXC6P09630 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
HOXC6P09630 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
HOXC6P09630 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
HOXC6P09630 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC23.62■■□□□ 1.37
HOXC6P09630 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
HOXC6P09630 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC23.62■■□□□ 1.37
HOXC6P09630 C11orf96-202ENST00000528572 1834 ntBASIC23.62■■□□□ 1.37
HOXC6P09630 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
HOXC6P09630 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
HOXC6P09630 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
HOXC6P09630 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC23.62■■□□□ 1.37
HOXC6P09630 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC23.62■■□□□ 1.37
HOXC6P09630 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC23.62■■□□□ 1.37
HOXC6P09630 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC23.62■■□□□ 1.37
HOXC6P09630 FAM197Y4-202ENST00000622692 608 ntBASIC23.62■■□□□ 1.37
HOXC6P09630 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
HOXC6P09630 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
HOXC6P09630 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
HOXC6P09630 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
HOXC6P09630 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
HOXC6P09630 NXN-202ENST00000537628 1340 ntTSL 3 BASIC23.61■■□□□ 1.37
HOXC6P09630 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
HOXC6P09630 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
HOXC6P09630 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
HOXC6P09630 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
HOXC6P09630 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC23.61■■□□□ 1.37
HOXC6P09630 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
HOXC6P09630 AC233263.1-201ENST00000578059 224 ntBASIC23.61■■□□□ 1.37
HOXC6P09630 Z99916.2-201ENST00000604037 246 ntBASIC23.61■■□□□ 1.37
HOXC6P09630 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
HOXC6P09630 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
HOXC6P09630 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC23.61■■□□□ 1.37
HOXC6P09630 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
HOXC6P09630 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
HOXC6P09630 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC23.6■■□□□ 1.37
HOXC6P09630 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.6■■□□□ 1.37
HOXC6P09630 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC23.6■■□□□ 1.37
HOXC6P09630 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
HOXC6P09630 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.6■■□□□ 1.37
HOXC6P09630 AC007322.3-201ENST00000426526 701 ntBASIC23.6■■□□□ 1.37
HOXC6P09630 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
HOXC6P09630 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC23.6■■□□□ 1.37
HOXC6P09630 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.6■■□□□ 1.37
HOXC6P09630 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC23.6■■□□□ 1.37
HOXC6P09630 OR2A1-AS1-207ENST00000486094 819 ntBASIC23.6■■□□□ 1.37
HOXC6P09630 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC23.6■■□□□ 1.37
HOXC6P09630 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC23.6■■□□□ 1.37
HOXC6P09630 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC23.6■■□□□ 1.37
HOXC6P09630 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC23.6■■□□□ 1.37
HOXC6P09630 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.6■■□□□ 1.37
HOXC6P09630 AC069544.1-201ENST00000609399 999 ntBASIC23.6■■□□□ 1.37
HOXC6P09630 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.6■■□□□ 1.37
HOXC6P09630 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
HOXC6P09630 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.6■■□□□ 1.37
HOXC6P09630 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC23.59■■□□□ 1.37
HOXC6P09630 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC23.59■■□□□ 1.37
HOXC6P09630 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HOXC6P09630 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HOXC6P09630 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC23.59■■□□□ 1.37
HOXC6P09630 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HOXC6P09630 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC23.59■■□□□ 1.37
HOXC6P09630 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.59■■□□□ 1.37
HOXC6P09630 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
HOXC6P09630 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HOXC6P09630 SOX15-203ENST00000570788 1093 ntBASIC23.59■■□□□ 1.37
HOXC6P09630 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC23.59■■□□□ 1.37
HOXC6P09630 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC23.59■■□□□ 1.37
HOXC6P09630 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC23.59■■□□□ 1.37
HOXC6P09630 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
HOXC6P09630 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
HOXC6P09630 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HOXC6P09630 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HOXC6P09630 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
HOXC6P09630 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
HOXC6P09630 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
HOXC6P09630 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
HOXC6P09630 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
HOXC6P09630 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
HOXC6P09630 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
HOXC6P09630 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.58■■□□□ 1.37
HOXC6P09630 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
HOXC6P09630 CYP21A1P-202ENST00000354927 1481 ntBASIC23.58■■□□□ 1.37
HOXC6P09630 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC23.58■■□□□ 1.37
HOXC6P09630 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC23.58■■□□□ 1.37
HOXC6P09630 CRK-204ENST00000574295 1391 ntTSL 5 BASIC23.58■■□□□ 1.37
HOXC6P09630 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
HOXC6P09630 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
HOXC6P09630 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC23.58■■□□□ 1.37
HOXC6P09630 HES2-205ENST00000487437 968 ntTSL 3 BASIC23.58■■□□□ 1.37
HOXC6P09630 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.58■■□□□ 1.37
HOXC6P09630 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.58■■□□□ 1.37
HOXC6P09630 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
HOXC6P09630 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
HOXC6P09630 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
HOXC6P09630 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
HOXC6P09630 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms