Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
CNOT4O95628 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.44■□□□□ 0.54
CNOT4O95628 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.44■□□□□ 0.54
CNOT4O95628 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.44■□□□□ 0.54
CNOT4O95628 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNOT4O95628 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.44■□□□□ 0.54
CNOT4O95628 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNOT4O95628 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CNOT4O95628 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.43■□□□□ 0.54
CNOT4O95628 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.43■□□□□ 0.54
CNOT4O95628 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNOT4O95628 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.43■□□□□ 0.54
CNOT4O95628 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.43■□□□□ 0.54
CNOT4O95628 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNOT4O95628 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNOT4O95628 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.43■□□□□ 0.54
CNOT4O95628 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.43■□□□□ 0.54
CNOT4O95628 RBM17P2-201ENST00000616397 1405 ntBASIC18.43■□□□□ 0.54
CNOT4O95628 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CNOT4O95628 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CNOT4O95628 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNOT4O95628 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.43■□□□□ 0.54
CNOT4O95628 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.43■□□□□ 0.54
CNOT4O95628 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.43■□□□□ 0.54
CNOT4O95628 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNOT4O95628 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CNOT4O95628 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNOT4O95628 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CNOT4O95628 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNOT4O95628 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
CNOT4O95628 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNOT4O95628 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CNOT4O95628 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CNOT4O95628 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNOT4O95628 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNOT4O95628 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.42■□□□□ 0.54
CNOT4O95628 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
CNOT4O95628 CNN2P6-201ENST00000439038 900 ntBASIC18.42■□□□□ 0.54
CNOT4O95628 AC245052.3-201ENST00000450182 901 ntBASIC18.42■□□□□ 0.54
CNOT4O95628 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.42■□□□□ 0.54
CNOT4O95628 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.42■□□□□ 0.54
CNOT4O95628 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNOT4O95628 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNOT4O95628 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNOT4O95628 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNOT4O95628 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNOT4O95628 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.42■□□□□ 0.54
CNOT4O95628 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.42■□□□□ 0.54
CNOT4O95628 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNOT4O95628 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNOT4O95628 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.41■□□□□ 0.54
CNOT4O95628 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNOT4O95628 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CNOT4O95628 MIR663A-201ENST00000385250 93 ntBASIC18.41■□□□□ 0.54
CNOT4O95628 GPX1P1-201ENST00000388829 606 ntBASIC18.41■□□□□ 0.54
CNOT4O95628 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.41■□□□□ 0.54
CNOT4O95628 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.41■□□□□ 0.54
CNOT4O95628 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.41■□□□□ 0.54
CNOT4O95628 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNOT4O95628 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNOT4O95628 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNOT4O95628 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNOT4O95628 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNOT4O95628 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT4O95628 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT4O95628 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT4O95628 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
CNOT4O95628 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT4O95628 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CNOT4O95628 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT4O95628 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT4O95628 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT4O95628 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.4■□□□□ 0.54
CNOT4O95628 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.4■□□□□ 0.54
CNOT4O95628 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.4■□□□□ 0.54
CNOT4O95628 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT4O95628 AC005181.1-201ENST00000604782 1256 ntBASIC18.4■□□□□ 0.54
CNOT4O95628 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT4O95628 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.4■□□□□ 0.54
CNOT4O95628 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT4O95628 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.4■□□□□ 0.54
CNOT4O95628 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT4O95628 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT4O95628 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT4O95628 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT4O95628 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.4■□□□□ 0.54
CNOT4O95628 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CNOT4O95628 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT4O95628 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CNOT4O95628 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CNOT4O95628 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT4O95628 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT4O95628 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT4O95628 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT4O95628 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT4O95628 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT4O95628 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CNOT4O95628 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT4O95628 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CNOT4O95628 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms