Protein–RNA interactions for Protein: A2ACP1

Ttc39a, Tetratricopeptide repeat protein 39A, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39aA2ACP1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.76■□□□□ 0.43
Ttc39aA2ACP1 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ttc39aA2ACP1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ttc39aA2ACP1 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.76■□□□□ 0.43
Ttc39aA2ACP1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ttc39aA2ACP1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ttc39aA2ACP1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.76■□□□□ 0.43
Ttc39aA2ACP1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ttc39aA2ACP1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ttc39aA2ACP1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ttc39aA2ACP1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.75■□□□□ 0.43
Ttc39aA2ACP1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ttc39aA2ACP1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ttc39aA2ACP1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ttc39aA2ACP1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ttc39aA2ACP1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ttc39aA2ACP1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ttc39aA2ACP1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ttc39aA2ACP1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ttc39aA2ACP1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ttc39aA2ACP1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.74■□□□□ 0.43
Ttc39aA2ACP1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ttc39aA2ACP1 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ttc39aA2ACP1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ttc39aA2ACP1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ttc39aA2ACP1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ttc39aA2ACP1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ttc39aA2ACP1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ttc39aA2ACP1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ttc39aA2ACP1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ttc39aA2ACP1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.73■□□□□ 0.43
Ttc39aA2ACP1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ttc39aA2ACP1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ttc39aA2ACP1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Ttc39aA2ACP1 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ttc39aA2ACP1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.73■□□□□ 0.43
Ttc39aA2ACP1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ttc39aA2ACP1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ttc39aA2ACP1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ttc39aA2ACP1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ttc39aA2ACP1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ttc39aA2ACP1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ttc39aA2ACP1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ttc39aA2ACP1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ttc39aA2ACP1 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ttc39aA2ACP1 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Ttc39aA2ACP1 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ttc39aA2ACP1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ttc39aA2ACP1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ttc39aA2ACP1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ttc39aA2ACP1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ttc39aA2ACP1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ttc39aA2ACP1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ttc39aA2ACP1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Ttc39aA2ACP1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ttc39aA2ACP1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Ttc39aA2ACP1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ttc39aA2ACP1 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.71■□□□□ 0.43
Ttc39aA2ACP1 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Ttc39aA2ACP1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.71■□□□□ 0.43
Ttc39aA2ACP1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.71■□□□□ 0.43
Ttc39aA2ACP1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ttc39aA2ACP1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ttc39aA2ACP1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
Ttc39aA2ACP1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ttc39aA2ACP1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ttc39aA2ACP1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ttc39aA2ACP1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.7■□□□□ 0.42
Ttc39aA2ACP1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ttc39aA2ACP1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ttc39aA2ACP1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.7■□□□□ 0.42
Ttc39aA2ACP1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ttc39aA2ACP1 Gm38285-201ENSMUST00000192928 922 ntBASIC17.7■□□□□ 0.42
Ttc39aA2ACP1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ttc39aA2ACP1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ttc39aA2ACP1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ttc39aA2ACP1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ttc39aA2ACP1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ttc39aA2ACP1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ttc39aA2ACP1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ttc39aA2ACP1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.7■□□□□ 0.42
Ttc39aA2ACP1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.7■□□□□ 0.42
Ttc39aA2ACP1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.69■□□□□ 0.42
Ttc39aA2ACP1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.69■□□□□ 0.42
Ttc39aA2ACP1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ttc39aA2ACP1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ttc39aA2ACP1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ttc39aA2ACP1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.69■□□□□ 0.42
Ttc39aA2ACP1 Gm15375-201ENSMUST00000119510 849 ntBASIC17.69■□□□□ 0.42
Ttc39aA2ACP1 Gm11643-201ENSMUST00000119578 864 ntBASIC17.69■□□□□ 0.42
Ttc39aA2ACP1 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.69■□□□□ 0.42
Ttc39aA2ACP1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ttc39aA2ACP1 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.69■□□□□ 0.42
Ttc39aA2ACP1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ttc39aA2ACP1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ttc39aA2ACP1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ttc39aA2ACP1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ttc39aA2ACP1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.69■□□□□ 0.42
Ttc39aA2ACP1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ttc39aA2ACP1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms