Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61bQ9CQS8 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC9.79□□□□□ -0.84
Sec61bQ9CQS8 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61bQ9CQS8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC9.79□□□□□ -0.84
Sec61bQ9CQS8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61bQ9CQS8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61bQ9CQS8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61bQ9CQS8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61bQ9CQS8 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61bQ9CQS8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61bQ9CQS8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61bQ9CQS8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61bQ9CQS8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61bQ9CQS8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61bQ9CQS8 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61bQ9CQS8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61bQ9CQS8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61bQ9CQS8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Sec61bQ9CQS8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Sec61bQ9CQS8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61bQ9CQS8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Gm13836-201ENSMUST00000121159 501 ntBASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 AC158538.1-201ENSMUST00000225870 294 ntBASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sec61bQ9CQS8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Sec61bQ9CQS8 Gm43868-201ENSMUST00000205187 2114 ntBASIC9.77□□□□□ -0.84
Sec61bQ9CQS8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Sec61bQ9CQS8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Sec61bQ9CQS8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC9.77□□□□□ -0.84
Sec61bQ9CQS8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Sec61bQ9CQS8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Sec61bQ9CQS8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.84
Sec61bQ9CQS8 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC9.77□□□□□ -0.85
Sec61bQ9CQS8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sec61bQ9CQS8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sec61bQ9CQS8 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sec61bQ9CQS8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sec61bQ9CQS8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Sec61bQ9CQS8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Sec61bQ9CQS8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC9.77□□□□□ -0.85
Sec61bQ9CQS8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Sec61bQ9CQS8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC9.77□□□□□ -0.85
Sec61bQ9CQS8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sec61bQ9CQS8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC9.77□□□□□ -0.85
Sec61bQ9CQS8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sec61bQ9CQS8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Sec61bQ9CQS8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sec61bQ9CQS8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Sec61bQ9CQS8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Sec61bQ9CQS8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sec61bQ9CQS8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Sec61bQ9CQS8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Sec61bQ9CQS8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sec61bQ9CQS8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sec61bQ9CQS8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Sec61bQ9CQS8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Sec61bQ9CQS8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sec61bQ9CQS8 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sec61bQ9CQS8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC9.77□□□□□ -0.85
Sec61bQ9CQS8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Sec61bQ9CQS8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61bQ9CQS8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61bQ9CQS8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61bQ9CQS8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61bQ9CQS8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61bQ9CQS8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Sec61bQ9CQS8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Sec61bQ9CQS8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61bQ9CQS8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms