Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 AC092053.2-201ENST00000640557 1818 ntBASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 MCRIP2P1-201ENST00000394346 511 ntBASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 TSPY15P-201ENST00000457163 923 ntBASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 AC069544.1-201ENST00000609399 999 ntBASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
KRTAP4-1Q9BYQ7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC10.9□□□□□ -0.66
KRTAP4-1Q9BYQ7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC10.9□□□□□ -0.66
KRTAP4-1Q9BYQ7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
KRTAP4-1Q9BYQ7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
KRTAP4-1Q9BYQ7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
KRTAP4-1Q9BYQ7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
KRTAP4-1Q9BYQ7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
KRTAP4-1Q9BYQ7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
KRTAP4-1Q9BYQ7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
KRTAP4-1Q9BYQ7 KRT18P68-201ENST00000392293 1000 ntBASIC10.9□□□□□ -0.66
KRTAP4-1Q9BYQ7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
KRTAP4-1Q9BYQ7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC10.9□□□□□ -0.66
KRTAP4-1Q9BYQ7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
KRTAP4-1Q9BYQ7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
KRTAP4-1Q9BYQ7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC10.9□□□□□ -0.66
KRTAP4-1Q9BYQ7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC10.9□□□□□ -0.66
KRTAP4-1Q9BYQ7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC10.9□□□□□ -0.66
KRTAP4-1Q9BYQ7 MAX-217ENST00000557277 728 ntTSL 3 BASIC10.9□□□□□ -0.66
KRTAP4-1Q9BYQ7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
KRTAP4-1Q9BYQ7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC10.9□□□□□ -0.66
KRTAP4-1Q9BYQ7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC10.9□□□□□ -0.66
KRTAP4-1Q9BYQ7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
KRTAP4-1Q9BYQ7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
KRTAP4-1Q9BYQ7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
KRTAP4-1Q9BYQ7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
KRTAP4-1Q9BYQ7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
KRTAP4-1Q9BYQ7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
KRTAP4-1Q9BYQ7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC10.9□□□□□ -0.66
KRTAP4-1Q9BYQ7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
KRTAP4-1Q9BYQ7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.67
KRTAP4-1Q9BYQ7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.67
KRTAP4-1Q9BYQ7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
KRTAP4-1Q9BYQ7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC10.89□□□□□ -0.67
KRTAP4-1Q9BYQ7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP4-1Q9BYQ7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP4-1Q9BYQ7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP4-1Q9BYQ7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP4-1Q9BYQ7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP4-1Q9BYQ7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP4-1Q9BYQ7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP4-1Q9BYQ7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP4-1Q9BYQ7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
KRTAP4-1Q9BYQ7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
KRTAP4-1Q9BYQ7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP4-1Q9BYQ7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC10.89□□□□□ -0.67
KRTAP4-1Q9BYQ7 AC245052.3-201ENST00000450182 901 ntBASIC10.89□□□□□ -0.67
KRTAP4-1Q9BYQ7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC10.89□□□□□ -0.67
KRTAP4-1Q9BYQ7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
KRTAP4-1Q9BYQ7 AL589743.5-201ENST00000616611 1050 ntBASIC10.89□□□□□ -0.67
KRTAP4-1Q9BYQ7 AC073912.3-201ENST00000624414 853 ntBASIC10.89□□□□□ -0.67
KRTAP4-1Q9BYQ7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP4-1Q9BYQ7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
KRTAP4-1Q9BYQ7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP4-1Q9BYQ7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP4-1Q9BYQ7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP4-1Q9BYQ7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP4-1Q9BYQ7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP4-1Q9BYQ7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP4-1Q9BYQ7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP4-1Q9BYQ7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC10.89□□□□□ -0.67
KRTAP4-1Q9BYQ7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP4-1Q9BYQ7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
KRTAP4-1Q9BYQ7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC10.88□□□□□ -0.67
KRTAP4-1Q9BYQ7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
KRTAP4-1Q9BYQ7 C9orf163-202ENST00000624034 2573 ntBASIC10.88□□□□□ -0.67
KRTAP4-1Q9BYQ7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
KRTAP4-1Q9BYQ7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC10.88□□□□□ -0.67
KRTAP4-1Q9BYQ7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
KRTAP4-1Q9BYQ7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
KRTAP4-1Q9BYQ7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms