Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.36■□□□□ 0.69
Usp1Q8BJQ2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp1Q8BJQ2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Usp1Q8BJQ2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp1Q8BJQ2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp1Q8BJQ2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp1Q8BJQ2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp1Q8BJQ2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp1Q8BJQ2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp1Q8BJQ2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp1Q8BJQ2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp1Q8BJQ2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.35■□□□□ 0.69
Usp1Q8BJQ2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.35■□□□□ 0.69
Usp1Q8BJQ2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp1Q8BJQ2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Usp1Q8BJQ2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Usp1Q8BJQ2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.35■□□□□ 0.69
Usp1Q8BJQ2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp1Q8BJQ2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp1Q8BJQ2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp1Q8BJQ2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp1Q8BJQ2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp1Q8BJQ2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp1Q8BJQ2 Gm37055-201ENSMUST00000191866 133 ntBASIC19.34■□□□□ 0.69
Usp1Q8BJQ2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Usp1Q8BJQ2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp1Q8BJQ2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp1Q8BJQ2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp1Q8BJQ2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp1Q8BJQ2 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.34■□□□□ 0.69
Usp1Q8BJQ2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp1Q8BJQ2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
Usp1Q8BJQ2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp1Q8BJQ2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp1Q8BJQ2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp1Q8BJQ2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Usp1Q8BJQ2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.33■□□□□ 0.68
Usp1Q8BJQ2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Usp1Q8BJQ2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.33■□□□□ 0.68
Usp1Q8BJQ2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Usp1Q8BJQ2 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Usp1Q8BJQ2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.33■□□□□ 0.68
Usp1Q8BJQ2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp1Q8BJQ2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Usp1Q8BJQ2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp1Q8BJQ2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp1Q8BJQ2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp1Q8BJQ2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp1Q8BJQ2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.32■□□□□ 0.68
Usp1Q8BJQ2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
Usp1Q8BJQ2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Usp1Q8BJQ2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp1Q8BJQ2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Usp1Q8BJQ2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp1Q8BJQ2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp1Q8BJQ2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.32■□□□□ 0.68
Usp1Q8BJQ2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.32■□□□□ 0.68
Usp1Q8BJQ2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp1Q8BJQ2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Usp1Q8BJQ2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp1Q8BJQ2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Usp1Q8BJQ2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp1Q8BJQ2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp1Q8BJQ2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp1Q8BJQ2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp1Q8BJQ2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp1Q8BJQ2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp1Q8BJQ2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp1Q8BJQ2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp1Q8BJQ2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp1Q8BJQ2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp1Q8BJQ2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Usp1Q8BJQ2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.31■□□□□ 0.68
Usp1Q8BJQ2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.31■□□□□ 0.68
Usp1Q8BJQ2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp1Q8BJQ2 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.31■□□□□ 0.68
Usp1Q8BJQ2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp1Q8BJQ2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Usp1Q8BJQ2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp1Q8BJQ2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Usp1Q8BJQ2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Usp1Q8BJQ2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp1Q8BJQ2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Usp1Q8BJQ2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp1Q8BJQ2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp1Q8BJQ2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Usp1Q8BJQ2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp1Q8BJQ2 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp1Q8BJQ2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Usp1Q8BJQ2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp1Q8BJQ2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp1Q8BJQ2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp1Q8BJQ2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp1Q8BJQ2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp1Q8BJQ2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Usp1Q8BJQ2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp1Q8BJQ2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Usp1Q8BJQ2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp1Q8BJQ2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp1Q8BJQ2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms