Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim6Q8BGE7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim6Q8BGE7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Trim6Q8BGE7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim6Q8BGE7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
Trim6Q8BGE7 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.39■□□□□ 0.69
Trim6Q8BGE7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim6Q8BGE7 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim6Q8BGE7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim6Q8BGE7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.39■□□□□ 0.69
Trim6Q8BGE7 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim6Q8BGE7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Trim6Q8BGE7 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim6Q8BGE7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim6Q8BGE7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Trim6Q8BGE7 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.38■□□□□ 0.69
Trim6Q8BGE7 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim6Q8BGE7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim6Q8BGE7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim6Q8BGE7 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.38■□□□□ 0.69
Trim6Q8BGE7 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.38■□□□□ 0.69
Trim6Q8BGE7 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim6Q8BGE7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim6Q8BGE7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim6Q8BGE7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim6Q8BGE7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim6Q8BGE7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim6Q8BGE7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim6Q8BGE7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim6Q8BGE7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim6Q8BGE7 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim6Q8BGE7 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim6Q8BGE7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Trim6Q8BGE7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim6Q8BGE7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim6Q8BGE7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Trim6Q8BGE7 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim6Q8BGE7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim6Q8BGE7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Trim6Q8BGE7 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Trim6Q8BGE7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.37■□□□□ 0.69
Trim6Q8BGE7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim6Q8BGE7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim6Q8BGE7 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim6Q8BGE7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trim6Q8BGE7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim6Q8BGE7 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim6Q8BGE7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim6Q8BGE7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim6Q8BGE7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.36■□□□□ 0.69
Trim6Q8BGE7 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim6Q8BGE7 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim6Q8BGE7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim6Q8BGE7 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim6Q8BGE7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.36■□□□□ 0.69
Trim6Q8BGE7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim6Q8BGE7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim6Q8BGE7 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.35■□□□□ 0.69
Trim6Q8BGE7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Trim6Q8BGE7 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim6Q8BGE7 Gm8493-201ENSMUST00000196881 489 ntBASIC19.35■□□□□ 0.69
Trim6Q8BGE7 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim6Q8BGE7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim6Q8BGE7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim6Q8BGE7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Trim6Q8BGE7 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim6Q8BGE7 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Trim6Q8BGE7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim6Q8BGE7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim6Q8BGE7 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim6Q8BGE7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim6Q8BGE7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim6Q8BGE7 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trim6Q8BGE7 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Trim6Q8BGE7 Gm21956-201ENSMUST00000179946 522 ntBASIC19.34■□□□□ 0.69
Trim6Q8BGE7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Trim6Q8BGE7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim6Q8BGE7 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim6Q8BGE7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim6Q8BGE7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim6Q8BGE7 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim6Q8BGE7 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.33■□□□□ 0.69
Trim6Q8BGE7 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.33■□□□□ 0.69
Trim6Q8BGE7 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim6Q8BGE7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.33■□□□□ 0.69
Trim6Q8BGE7 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.33■□□□□ 0.69
Trim6Q8BGE7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim6Q8BGE7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim6Q8BGE7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim6Q8BGE7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim6Q8BGE7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim6Q8BGE7 Gm43173-201ENSMUST00000202246 593 ntBASIC19.33■□□□□ 0.68
Trim6Q8BGE7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim6Q8BGE7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim6Q8BGE7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim6Q8BGE7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim6Q8BGE7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Trim6Q8BGE7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim6Q8BGE7 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim6Q8BGE7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms