Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Upk3bQ80YF6 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Upk3bQ80YF6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Upk3bQ80YF6 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Upk3bQ80YF6 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Upk3bQ80YF6 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.45■□□□□ 0.06
Upk3bQ80YF6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.45■□□□□ 0.06
Upk3bQ80YF6 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Upk3bQ80YF6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Upk3bQ80YF6 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Upk3bQ80YF6 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Upk3bQ80YF6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Upk3bQ80YF6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Upk3bQ80YF6 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Upk3bQ80YF6 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Upk3bQ80YF6 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Upk3bQ80YF6 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Upk3bQ80YF6 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Upk3bQ80YF6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Upk3bQ80YF6 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Upk3bQ80YF6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Upk3bQ80YF6 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Upk3bQ80YF6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Upk3bQ80YF6 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.44■□□□□ 0.06
Upk3bQ80YF6 Gm8493-201ENSMUST00000196881 489 ntBASIC15.44■□□□□ 0.06
Upk3bQ80YF6 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.44■□□□□ 0.06
Upk3bQ80YF6 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Upk3bQ80YF6 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Upk3bQ80YF6 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Upk3bQ80YF6 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Upk3bQ80YF6 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Upk3bQ80YF6 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Upk3bQ80YF6 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Upk3bQ80YF6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Upk3bQ80YF6 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Upk3bQ80YF6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Upk3bQ80YF6 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Upk3bQ80YF6 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Upk3bQ80YF6 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Upk3bQ80YF6 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Upk3bQ80YF6 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.43■□□□□ 0.06
Upk3bQ80YF6 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Upk3bQ80YF6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Upk3bQ80YF6 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Upk3bQ80YF6 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Upk3bQ80YF6 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Upk3bQ80YF6 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Upk3bQ80YF6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Upk3bQ80YF6 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Upk3bQ80YF6 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Upk3bQ80YF6 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Upk3bQ80YF6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Upk3bQ80YF6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Upk3bQ80YF6 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.42■□□□□ 0.06
Upk3bQ80YF6 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC15.42■□□□□ 0.06
Upk3bQ80YF6 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
Upk3bQ80YF6 Gm43173-201ENSMUST00000202246 593 ntBASIC15.42■□□□□ 0.06
Upk3bQ80YF6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Upk3bQ80YF6 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Upk3bQ80YF6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Upk3bQ80YF6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Upk3bQ80YF6 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Upk3bQ80YF6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Upk3bQ80YF6 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Upk3bQ80YF6 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Upk3bQ80YF6 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Upk3bQ80YF6 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Upk3bQ80YF6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Upk3bQ80YF6 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Upk3bQ80YF6 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Upk3bQ80YF6 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.41■□□□□ 0.06
Upk3bQ80YF6 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Upk3bQ80YF6 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Upk3bQ80YF6 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Upk3bQ80YF6 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Upk3bQ80YF6 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Upk3bQ80YF6 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Upk3bQ80YF6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Upk3bQ80YF6 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Upk3bQ80YF6 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Upk3bQ80YF6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.41■□□□□ 0.06
Upk3bQ80YF6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Upk3bQ80YF6 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
Upk3bQ80YF6 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.41■□□□□ 0.06
Upk3bQ80YF6 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Upk3bQ80YF6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Upk3bQ80YF6 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Upk3bQ80YF6 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Upk3bQ80YF6 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Upk3bQ80YF6 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Upk3bQ80YF6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Upk3bQ80YF6 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.41■□□□□ 0.06
Upk3bQ80YF6 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Upk3bQ80YF6 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Upk3bQ80YF6 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Upk3bQ80YF6 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Upk3bQ80YF6 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Upk3bQ80YF6 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Upk3bQ80YF6 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Upk3bQ80YF6 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms