Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 IKBKGP1-201ENST00000612193 1073 ntBASIC20.74■□□□□ 0.91
LDLRAP1Q5SW96 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LDLRAP1Q5SW96 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LDLRAP1Q5SW96 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.74■□□□□ 0.91
LDLRAP1Q5SW96 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
LDLRAP1Q5SW96 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.74■□□□□ 0.91
LDLRAP1Q5SW96 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.74■□□□□ 0.91
LDLRAP1Q5SW96 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.74■□□□□ 0.91
LDLRAP1Q5SW96 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.74■□□□□ 0.91
LDLRAP1Q5SW96 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LDLRAP1Q5SW96 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.73■□□□□ 0.91
LDLRAP1Q5SW96 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LDLRAP1Q5SW96 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LDLRAP1Q5SW96 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
LDLRAP1Q5SW96 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.73■□□□□ 0.91
LDLRAP1Q5SW96 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.73■□□□□ 0.91
LDLRAP1Q5SW96 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.73■□□□□ 0.91
LDLRAP1Q5SW96 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LDLRAP1Q5SW96 AC092437.1-201ENST00000624794 1048 ntBASIC20.73■□□□□ 0.91
LDLRAP1Q5SW96 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LDLRAP1Q5SW96 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
LDLRAP1Q5SW96 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LDLRAP1Q5SW96 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LDLRAP1Q5SW96 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LDLRAP1Q5SW96 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LDLRAP1Q5SW96 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LDLRAP1Q5SW96 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LDLRAP1Q5SW96 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
LDLRAP1Q5SW96 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LDLRAP1Q5SW96 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LDLRAP1Q5SW96 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
LDLRAP1Q5SW96 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LDLRAP1Q5SW96 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LDLRAP1Q5SW96 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LDLRAP1Q5SW96 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.72■□□□□ 0.91
LDLRAP1Q5SW96 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.72■□□□□ 0.91
LDLRAP1Q5SW96 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LDLRAP1Q5SW96 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.72■□□□□ 0.91
LDLRAP1Q5SW96 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.72■□□□□ 0.91
LDLRAP1Q5SW96 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
LDLRAP1Q5SW96 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LDLRAP1Q5SW96 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LDLRAP1Q5SW96 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.72■□□□□ 0.91
LDLRAP1Q5SW96 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LDLRAP1Q5SW96 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.72■□□□□ 0.91
LDLRAP1Q5SW96 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.72■□□□□ 0.91
LDLRAP1Q5SW96 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.72■□□□□ 0.91
LDLRAP1Q5SW96 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.72■□□□□ 0.91
LDLRAP1Q5SW96 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.72■□□□□ 0.91
LDLRAP1Q5SW96 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LDLRAP1Q5SW96 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.72■□□□□ 0.91
LDLRAP1Q5SW96 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LDLRAP1Q5SW96 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LDLRAP1Q5SW96 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LDLRAP1Q5SW96 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
LDLRAP1Q5SW96 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.71■□□□□ 0.91
LDLRAP1Q5SW96 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.71■□□□□ 0.91
LDLRAP1Q5SW96 BID-214ENST00000617586 542 ntTSL 5 BASIC20.71■□□□□ 0.91
LDLRAP1Q5SW96 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LDLRAP1Q5SW96 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LDLRAP1Q5SW96 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
LDLRAP1Q5SW96 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.7■□□□□ 0.9
LDLRAP1Q5SW96 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.7■□□□□ 0.9
LDLRAP1Q5SW96 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LDLRAP1Q5SW96 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.7■□□□□ 0.9
LDLRAP1Q5SW96 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.7■□□□□ 0.9
LDLRAP1Q5SW96 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.7■□□□□ 0.9
LDLRAP1Q5SW96 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.7■□□□□ 0.9
LDLRAP1Q5SW96 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.7■□□□□ 0.9
LDLRAP1Q5SW96 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.7■□□□□ 0.9
LDLRAP1Q5SW96 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LDLRAP1Q5SW96 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LDLRAP1Q5SW96 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.7■□□□□ 0.9
LDLRAP1Q5SW96 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LDLRAP1Q5SW96 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
LDLRAP1Q5SW96 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LDLRAP1Q5SW96 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LDLRAP1Q5SW96 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LDLRAP1Q5SW96 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LDLRAP1Q5SW96 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LDLRAP1Q5SW96 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LDLRAP1Q5SW96 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.69■□□□□ 0.9
LDLRAP1Q5SW96 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LDLRAP1Q5SW96 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.69■□□□□ 0.9
LDLRAP1Q5SW96 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.69■□□□□ 0.9
LDLRAP1Q5SW96 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LDLRAP1Q5SW96 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LDLRAP1Q5SW96 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.69■□□□□ 0.9
LDLRAP1Q5SW96 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.68■□□□□ 0.9
LDLRAP1Q5SW96 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LDLRAP1Q5SW96 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.68■□□□□ 0.9
LDLRAP1Q5SW96 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LDLRAP1Q5SW96 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LDLRAP1Q5SW96 AC004911.1-201ENST00000416316 871 ntBASIC20.68■□□□□ 0.9
LDLRAP1Q5SW96 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.68■□□□□ 0.9
LDLRAP1Q5SW96 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.68■□□□□ 0.9
LDLRAP1Q5SW96 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.68■□□□□ 0.9
LDLRAP1Q5SW96 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.68■□□□□ 0.9
LDLRAP1Q5SW96 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.68■□□□□ 0.9
LDLRAP1Q5SW96 MFSD11-216ENST00000590393 1141 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms