Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cks1bP61025 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cks1bP61025 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cks1bP61025 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cks1bP61025 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cks1bP61025 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cks1bP61025 Gm42918-201ENSMUST00000199249 1580 ntBASIC13□□□□□ -0.33
Cks1bP61025 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cks1bP61025 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cks1bP61025 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Cks1bP61025 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cks1bP61025 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cks1bP61025 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cks1bP61025 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cks1bP61025 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cks1bP61025 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cks1bP61025 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Cks1bP61025 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Cks1bP61025 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1bP61025 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Cks1bP61025 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Cks1bP61025 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1bP61025 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1bP61025 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1bP61025 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1bP61025 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
Cks1bP61025 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1bP61025 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC12.99□□□□□ -0.33
Cks1bP61025 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cks1bP61025 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1bP61025 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1bP61025 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1bP61025 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1bP61025 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1bP61025 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1bP61025 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1bP61025 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1bP61025 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cks1bP61025 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cks1bP61025 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.98□□□□□ -0.33
Cks1bP61025 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cks1bP61025 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC12.98□□□□□ -0.33
Cks1bP61025 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cks1bP61025 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cks1bP61025 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cks1bP61025 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cks1bP61025 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cks1bP61025 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cks1bP61025 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cks1bP61025 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cks1bP61025 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC12.98□□□□□ -0.33
Cks1bP61025 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cks1bP61025 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cks1bP61025 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1bP61025 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1bP61025 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1bP61025 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Cks1bP61025 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.97□□□□□ -0.33
Cks1bP61025 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1bP61025 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cks1bP61025 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1bP61025 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1bP61025 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1bP61025 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Cks1bP61025 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1bP61025 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1bP61025 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1bP61025 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Cks1bP61025 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1bP61025 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC12.97□□□□□ -0.33
Cks1bP61025 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1bP61025 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cks1bP61025 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1bP61025 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cks1bP61025 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1bP61025 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1bP61025 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1bP61025 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1bP61025 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cks1bP61025 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cks1bP61025 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cks1bP61025 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cks1bP61025 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cks1bP61025 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cks1bP61025 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cks1bP61025 AA386476-201ENSMUST00000098781 1665 ntBASIC12.96□□□□□ -0.33
Cks1bP61025 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cks1bP61025 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cks1bP61025 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
Cks1bP61025 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cks1bP61025 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cks1bP61025 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cks1bP61025 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC12.96□□□□□ -0.33
Cks1bP61025 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cks1bP61025 Gm7417-201ENSMUST00000192950 473 ntBASIC12.96□□□□□ -0.33
Cks1bP61025 Gm10657-201ENSMUST00000193528 1031 ntBASIC12.96□□□□□ -0.33
Cks1bP61025 AC126028.2-201ENSMUST00000228100 1833 ntBASIC12.96□□□□□ -0.33
Cks1bP61025 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cks1bP61025 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cks1bP61025 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms