Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpne2P59108 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.39■□□□□ 0.05
Cpne2P59108 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cpne2P59108 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cpne2P59108 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Cpne2P59108 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpne2P59108 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
Cpne2P59108 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cpne2P59108 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpne2P59108 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.38■□□□□ 0.05
Cpne2P59108 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.38■□□□□ 0.05
Cpne2P59108 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Cpne2P59108 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpne2P59108 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cpne2P59108 Gm13241-201ENSMUST00000094493 780 ntBASIC15.38■□□□□ 0.05
Cpne2P59108 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Cpne2P59108 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpne2P59108 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpne2P59108 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Cpne2P59108 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpne2P59108 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.38■□□□□ 0.05
Cpne2P59108 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Cpne2P59108 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cpne2P59108 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.37■□□□□ 0.05
Cpne2P59108 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpne2P59108 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Cpne2P59108 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpne2P59108 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.37■□□□□ 0.05
Cpne2P59108 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.37■□□□□ 0.05
Cpne2P59108 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.37■□□□□ 0.05
Cpne2P59108 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cpne2P59108 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Cpne2P59108 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpne2P59108 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Cpne2P59108 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.37■□□□□ 0.05
Cpne2P59108 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpne2P59108 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpne2P59108 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpne2P59108 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cpne2P59108 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpne2P59108 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Cpne2P59108 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Cpne2P59108 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne2P59108 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne2P59108 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne2P59108 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne2P59108 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Cpne2P59108 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne2P59108 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Cpne2P59108 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne2P59108 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne2P59108 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne2P59108 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.36■□□□□ 0.05
Cpne2P59108 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne2P59108 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.36■□□□□ 0.05
Cpne2P59108 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC15.36■□□□□ 0.05
Cpne2P59108 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.36■□□□□ 0.05
Cpne2P59108 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.36■□□□□ 0.05
Cpne2P59108 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne2P59108 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.36■□□□□ 0.05
Cpne2P59108 Spcs1-204ENSMUST00000226782 949 ntBASIC15.36■□□□□ 0.05
Cpne2P59108 Serp2-204ENSMUST00000228055 705 ntBASIC15.36■□□□□ 0.05
Cpne2P59108 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne2P59108 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne2P59108 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne2P59108 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne2P59108 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne2P59108 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne2P59108 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne2P59108 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne2P59108 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne2P59108 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne2P59108 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne2P59108 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Cpne2P59108 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpne2P59108 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpne2P59108 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpne2P59108 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cpne2P59108 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
Cpne2P59108 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpne2P59108 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Cpne2P59108 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Cpne2P59108 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Cpne2P59108 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpne2P59108 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cpne2P59108 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpne2P59108 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpne2P59108 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpne2P59108 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Cpne2P59108 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpne2P59108 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpne2P59108 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cpne2P59108 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpne2P59108 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpne2P59108 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Cpne2P59108 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpne2P59108 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cpne2P59108 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpne2P59108 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cpne2P59108 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms