Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cd40lgP27548 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cd40lgP27548 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd40lgP27548 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd40lgP27548 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd40lgP27548 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cd40lgP27548 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Cd40lgP27548 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd40lgP27548 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd40lgP27548 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cd40lgP27548 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.78■□□□□ 0.28
Cd40lgP27548 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cd40lgP27548 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd40lgP27548 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Cd40lgP27548 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.78■□□□□ 0.28
Cd40lgP27548 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd40lgP27548 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd40lgP27548 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd40lgP27548 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd40lgP27548 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd40lgP27548 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cd40lgP27548 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd40lgP27548 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd40lgP27548 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cd40lgP27548 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cd40lgP27548 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cd40lgP27548 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cd40lgP27548 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cd40lgP27548 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Cd40lgP27548 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.77■□□□□ 0.28
Cd40lgP27548 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.77■□□□□ 0.28
Cd40lgP27548 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cd40lgP27548 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cd40lgP27548 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.77■□□□□ 0.27
Cd40lgP27548 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cd40lgP27548 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cd40lgP27548 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cd40lgP27548 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cd40lgP27548 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cd40lgP27548 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cd40lgP27548 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cd40lgP27548 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cd40lgP27548 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cd40lgP27548 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd40lgP27548 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd40lgP27548 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd40lgP27548 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.76■□□□□ 0.27
Cd40lgP27548 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cd40lgP27548 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cd40lgP27548 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd40lgP27548 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.76■□□□□ 0.27
Cd40lgP27548 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cd40lgP27548 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cd40lgP27548 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cd40lgP27548 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd40lgP27548 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.76■□□□□ 0.27
Cd40lgP27548 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cd40lgP27548 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cd40lgP27548 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd40lgP27548 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.76■□□□□ 0.27
Cd40lgP27548 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd40lgP27548 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd40lgP27548 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd40lgP27548 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.75■□□□□ 0.27
Cd40lgP27548 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.75■□□□□ 0.27
Cd40lgP27548 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd40lgP27548 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd40lgP27548 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd40lgP27548 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd40lgP27548 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cd40lgP27548 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd40lgP27548 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd40lgP27548 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd40lgP27548 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cd40lgP27548 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cd40lgP27548 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cd40lgP27548 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.74■□□□□ 0.27
Cd40lgP27548 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.74■□□□□ 0.27
Cd40lgP27548 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.74■□□□□ 0.27
Cd40lgP27548 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cd40lgP27548 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cd40lgP27548 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.74■□□□□ 0.27
Cd40lgP27548 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cd40lgP27548 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Cd40lgP27548 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
Cd40lgP27548 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
Cd40lgP27548 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd40lgP27548 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd40lgP27548 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd40lgP27548 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd40lgP27548 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd40lgP27548 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd40lgP27548 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cd40lgP27548 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.73■□□□□ 0.27
Cd40lgP27548 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.73■□□□□ 0.27
Cd40lgP27548 Gm5408-201ENSMUST00000197998 747 ntBASIC16.73■□□□□ 0.27
Cd40lgP27548 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cd40lgP27548 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.73■□□□□ 0.27
Cd40lgP27548 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.73■□□□□ 0.27
Cd40lgP27548 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms