Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
TGFAP01135 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TGFAP01135 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TGFAP01135 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
TGFAP01135 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.18■□□□□ 0.34
TGFAP01135 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TGFAP01135 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TGFAP01135 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TGFAP01135 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
TGFAP01135 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.17■□□□□ 0.34
TGFAP01135 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
TGFAP01135 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
TGFAP01135 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TGFAP01135 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TGFAP01135 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.17■□□□□ 0.34
TGFAP01135 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TGFAP01135 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.17■□□□□ 0.34
TGFAP01135 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TGFAP01135 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TGFAP01135 AC091799.1-201ENST00000422823 811 ntBASIC17.17■□□□□ 0.34
TGFAP01135 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TGFAP01135 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.17■□□□□ 0.34
TGFAP01135 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.17■□□□□ 0.34
TGFAP01135 UNC93B4-201ENST00000505679 747 ntBASIC17.17■□□□□ 0.34
TGFAP01135 AC073648.6-201ENST00000641589 218 ntBASIC17.17■□□□□ 0.34
TGFAP01135 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.17■□□□□ 0.34
TGFAP01135 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TGFAP01135 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TGFAP01135 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TGFAP01135 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TGFAP01135 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TGFAP01135 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TGFAP01135 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TGFAP01135 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.16■□□□□ 0.34
TGFAP01135 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TGFAP01135 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TGFAP01135 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TGFAP01135 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TGFAP01135 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TGFAP01135 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.16■□□□□ 0.34
TGFAP01135 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TGFAP01135 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.16■□□□□ 0.34
TGFAP01135 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TGFAP01135 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.16■□□□□ 0.34
TGFAP01135 CYP2T3P-201ENST00000601990 817 ntBASIC17.16■□□□□ 0.34
TGFAP01135 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TGFAP01135 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TGFAP01135 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TGFAP01135 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TGFAP01135 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TGFAP01135 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TGFAP01135 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TGFAP01135 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TGFAP01135 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TGFAP01135 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.15■□□□□ 0.34
TGFAP01135 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TGFAP01135 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.15■□□□□ 0.34
TGFAP01135 AL589743.5-201ENST00000616611 1050 ntBASIC17.15■□□□□ 0.34
TGFAP01135 AC100791.3-201ENST00000617619 330 ntBASIC17.15■□□□□ 0.34
TGFAP01135 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
TGFAP01135 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TGFAP01135 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.15■□□□□ 0.34
TGFAP01135 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
TGFAP01135 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TGFAP01135 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.14■□□□□ 0.34
TGFAP01135 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TGFAP01135 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
TGFAP01135 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.14■□□□□ 0.34
TGFAP01135 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TGFAP01135 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TGFAP01135 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TGFAP01135 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TGFAP01135 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.14■□□□□ 0.33
TGFAP01135 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.14■□□□□ 0.33
TGFAP01135 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.14■□□□□ 0.33
TGFAP01135 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.14■□□□□ 0.33
TGFAP01135 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TGFAP01135 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.14■□□□□ 0.33
TGFAP01135 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.14■□□□□ 0.33
TGFAP01135 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TGFAP01135 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TGFAP01135 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TGFAP01135 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TGFAP01135 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TGFAP01135 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TGFAP01135 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TGFAP01135 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TGFAP01135 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TGFAP01135 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TGFAP01135 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TGFAP01135 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.13■□□□□ 0.33
TGFAP01135 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.13■□□□□ 0.33
TGFAP01135 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TGFAP01135 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.13■□□□□ 0.33
TGFAP01135 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.13■□□□□ 0.33
TGFAP01135 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.13■□□□□ 0.33
TGFAP01135 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TGFAP01135 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
TGFAP01135 AC060766.5-201ENST00000590539 871 ntBASIC17.13■□□□□ 0.33
TGFAP01135 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms